wangsz@fio_org_cn
New Member
When I ported CESM1.2.2 on my own server, creatnewcase and cesm_setup did well. But build reported the following error:-------------------------------------------------------------------------
CESM BUILDNML SCRIPT STARTING
- To prestage restarts, untar a restart.tar file into /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/run
infile is /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Buildconf/cplconf/cesm_namelist
CESM BUILDNML SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM PRESTAGE SCRIPT STARTING
- Case input data directory, DIN_LOC_ROOT, is /soa01/home/yangxd/wangsz/inputdata
- Checking the existence of input datasets in DIN_LOC_ROOT
CESM PRESTAGE SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM BUILDEXE SCRIPT STARTING
rm: No match.
COMPILER is intel
- Build Libraries: mct gptl pio csm_share
Wed Jun 8 08:56:07 CST 2016 /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
ERROR: buildlib.mct failed, see /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
ERROR: cat /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604Then I checked the mentioned bldlog file:yangxd@latecomer03:test02> cat /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
Wed Jun 8 08:56:07 CST 2016 /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
setenv MCT_DIR /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct
setenv LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads
setenv MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
echo MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
cd /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
echo Copying source to CCSM EXEROOT...
Copying source to CCSM EXEROOT...
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/Makefile .
mkdir mct
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mct/Makefile mct
mkdir mpeu
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpeu/Makefile mpeu
cp: cannot stat `/soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpeu/Makefile': No such file or directory
mkdir mpi-serial
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpi-serial/Makefile mpi-serial
cp: cannot stat `/soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpi-serial/Makefile': No such file or directory
set runconf = 0
set runclean = 0
echo Running configure...
Running configure...
echo for OS=LINUX MACH=FIOCESM
for OS=LINUX MACH=FIOCESM
gmake -f /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/Makefile /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct/Makefile.conf
cat: Filepath: No such file or directory
cat: Srcfiles: No such file or directory
/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/mkSrcfiles
gmake: execvp: /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/mkSrcfiles: Permission denied
SHAREDLIBROOT |/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld| SHAREDPATH |/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads|
/bin/sh: line 1: /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/configure: Permission denied
gmake: *** [/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct/Makefile.conf] Error 126
if ( 0 == 1 ) then
cp -p Makefile.conf Makefile.conf.old
cp: cannot stat `Makefile.conf': No such file or directory
gmake
Makefile:4: Makefile.conf: No such file or directory
gmake: *** No rule to make target `Makefile.conf'. Stop.
exit 1But there are no Makefiles in the following two directories:/models/utils/mct/mpeu//models/utils/mct/mpi-serial/So I wonder is it my wrong configuration or incomplete download of the source codes that causes the error? Any suggestion could be helpful.Thanks,Shizhu Wang
CESM BUILDNML SCRIPT STARTING
- To prestage restarts, untar a restart.tar file into /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/run
infile is /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Buildconf/cplconf/cesm_namelist
CESM BUILDNML SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM PRESTAGE SCRIPT STARTING
- Case input data directory, DIN_LOC_ROOT, is /soa01/home/yangxd/wangsz/inputdata
- Checking the existence of input datasets in DIN_LOC_ROOT
CESM PRESTAGE SCRIPT HAS FINISHED SUCCESSFULLY
-------------------------------------------------------------------------
-------------------------------------------------------------------------
CESM BUILDEXE SCRIPT STARTING
rm: No match.
COMPILER is intel
- Build Libraries: mct gptl pio csm_share
Wed Jun 8 08:56:07 CST 2016 /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
ERROR: buildlib.mct failed, see /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
ERROR: cat /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604Then I checked the mentioned bldlog file:yangxd@latecomer03:test02> cat /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
Wed Jun 8 08:56:07 CST 2016 /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct.bldlog.160608-085604
setenv MCT_DIR /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct
setenv LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads
setenv MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
echo MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
MCT_LIBDIR /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
cd /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct
echo Copying source to CCSM EXEROOT...
Copying source to CCSM EXEROOT...
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/Makefile .
mkdir mct
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mct/Makefile mct
mkdir mpeu
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpeu/Makefile mpeu
cp: cannot stat `/soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpeu/Makefile': No such file or directory
mkdir mpi-serial
cp /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpi-serial/Makefile mpi-serial
cp: cannot stat `/soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/mpi-serial/Makefile': No such file or directory
set runconf = 0
set runclean = 0
echo Running configure...
Running configure...
echo for OS=LINUX MACH=FIOCESM
for OS=LINUX MACH=FIOCESM
gmake -f /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/Makefile /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct/Makefile.conf
cat: Filepath: No such file or directory
cat: Srcfiles: No such file or directory
/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/mkSrcfiles
gmake: execvp: /soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/Tools/mkSrcfiles: Permission denied
SHAREDLIBROOT |/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld| SHAREDPATH |/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads|
/bin/sh: line 1: /soa01/home/yangxd/wangsz/cesm1_2_2/models/utils/mct/configure: Permission denied
gmake: *** [/soa01/home/yangxd/wangsz/cesm1_2_2/scripts/test02/bld/intel/mpich/nodebug/nothreads/mct/Makefile.conf] Error 126
if ( 0 == 1 ) then
cp -p Makefile.conf Makefile.conf.old
cp: cannot stat `Makefile.conf': No such file or directory
gmake
Makefile:4: Makefile.conf: No such file or directory
gmake: *** No rule to make target `Makefile.conf'. Stop.
exit 1But there are no Makefiles in the following two directories:/models/utils/mct/mpeu//models/utils/mct/mpi-serial/So I wonder is it my wrong configuration or incomplete download of the source codes that causes the error? Any suggestion could be helpful.Thanks,Shizhu Wang