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CESM1.1.1 CAM5 daily output

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wliu.ucsd@...
CESM1.1.1 CAM5 daily output

Hi, there

I am running CESM1.1.1. (CAM5) for a 1850 control case. I want to get daily output
for several atmosphere variables but failed to do that. Below is what I have done
I modified "cam.buildnml.csh" and build the case.

cat >! $CASEBUILD/camconf/cesm_namelist << EOF2
&cam_inparm
dtime = $dtime
$ncdata
$cam_branch_file
$co2vmr
$start_ymd
$scmb
nhtfrq =0,-24,-24,-24
mfilt =1,1,1,1
fincl2='U','V','OMEGA','T','Q'
fincl3='DTV'
fincl4='PS',PSL'
EOF2

And I did find it changed in atm_in in the $case/run dictionary
&cam_inparm
bnd_topo = '/glade/p/cesmdata/cseg/inputdata/atm/cam/topo/USGS-gtopo30_0.9x1.25_remap_c051027.nc'
dtime = 1800
fincl2 = 'U','V','OMEGA','T','Q',
fincl3 = 'DTV'
fincl4 = 'PS', 'PSL'
mfilt = 1,1,1,1
ncdata = 'b.e11.B1850C5CN.f09_g16.005.cam.i.0301-01-01-00000.nc'
nhtfrq = 0,-24,-24,-24
print_energy_errors = .false.

The model ran well but only gave me the monthly output.

Could someone help to check what wrong there? Thanks a lot!

Best
W

Wei Liu

mai

What you did is the old way.

Now these lines:

nhtfrq                 =0,-24,-24,-24
mfilt                  =1,1,1,1
fincl2='U','V','OMEGA','T','Q'
fincl3='DTV'
fincl4='PS',PSL'


go into a file called user_nl_cam in the case directory. You will have to do the run again from the beginning.

wliu.ucsd@...

Dear Mai

    Thanks a lot! I think it's equivalent since in "cam.buildnml.csh"

below what I added is

if (-e $CASEROOT/user_nl_cam${inst_string}) then

  $UTILROOT/Tools/user_nl_add -user_nl_file $CASEROOT/user_nl_cam${inst_string} >> $CASEBUILD/camconf/cesm_namelist

endif

cat >> $CASEBUILD/camconf/cesm_namelist << EOF2

/

EOF2

 

So I follow the way you suggested and added lines in $case/user_nl_cam 

and do the run again from the beginning, I can still not get the daily ouput.

 

I checked, these lines have been added in

$case/Buildconf/camconf/atm_in

$case/Buildconf/camconf/cesm_namelist 

also under the scratch dictionary, in

$case/run/atm_in

 

In my idea, $case/run/atm_in should be the one controls model when it's running, right?

Is there any other switch I need to turn on for the daily output?

 

Best

W

 

 

   

Wei Liu

hannay

The model is using the file atm_in in:$case/run/atm_in

Can you check your atm_in: $case/run/atm_in

fincl2         = 'U','V','OMEGA','T','Q',
fincl3         = 'DTV'
fincl4         = 'PS', 'PSL'
mfilt          = 1,1,1,1
ncdata         = 'b.e11.B1850C5CN.f09_g16.005.cam.i.0301-01-01-00000.nc'
nhtfrq         = 0,-24,-24,-24

I think it is what you did but I want to double check.

 

hannay

One more question: did you add namelist variables these after a first submission ?

If you are continuing the run, CAM will ignore the change in namelist values.

Please check the value of "CONTINUE_RUN"  in env_run.xml

It should be:

<entry id="CONTINUE_RUN"   value="FALSE"  /> 

wliu.ucsd@...

Dear Hannay

    Thanks. Yes, I checked the atm_in in: $case/run/atm_in

and below it is what contained in $case/run/atm_in

 

&cam_inparm

 bnd_topo               = '/glade/p/cesmdata/cseg/inputdata/atm/cam/topo/USGS-gtopo30_0.9x1.25_remap_c051027.nc'

 cam_branch_file                = '/glade/scratch/wliu/C3031/run/b.e11.B1850C5CN.f09_g16.005.cam.r.1301-01-01-00000.nc'

 dtime          = 1800

 fincl2         = 'U','V','OMEGA','T','Q'

 fincl3         =  'DTV'

 fincl4         = 'PS', 'PSL'

 mfilt          = 1,1,1,1

 ncdata         = '/glade/p/cesmdata/cseg/inputdata/atm/cam/inic/fv/cami-mam3_0000-01-01_0.9x1.25_L30_c100618.nc'

 nhtfrq         = 0,-24,-24,-24

 print_energy_errors            = .false.

/

 BestW

Wei Liu

hannay

One more question: did you add namelist variables these after a first submission ?

If you are continuing the run, CAM will ignore the change in namelist values.

Please check the value of "CONTINUE_RUN"  in env_run.xml

It should be:

<entry id="CONTINUE_RUN"   value="FALSE"  /> 

 
wliu.ucsd@...

Dear Hannay

   The problem fixed, should be the continue run setting. 

Thanks a lot!

 

Best

W

   

Wei Liu

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