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cesm2.0 MPT/2.19 Error

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kezhoulumelody@...
cesm2.0 MPT/2.19 Error

To whom it may concern,

I am using cesm2.0 and encounterd a problem associated with MPT/2.19 error. After creating the case, I updated the following modules by modifying env_mach_specific.xml file:

intel/17.0.1

pnetcdf/1.11.0

netcef/4.6.1

netcdf-mpi/4.6.1

mpt/2.19

I had no problem setting up or building the case. However, after I submitted my case, I got the following error message immediately:

MPT ERROR: invalid option -p

(HPE MPT 2.19 12/07/18 05:32:16)

But if I use mpt/2.16 module as before, I would still get the error message:

ERROR: module command /glade/u/apps/ch/opt/lmod/7.5.3/lmod/lmod/libexec/lmod python load ncarenv/1.2 intel/17.0.1 esmf_libs mkl esmf-7.0.0-defio-mpi-O mpt/2.16 netcdf-mpi/4.6.1 pnetcdf/1.11.0 ncarcompilers/0.4.1 failed with message:

Please do not use this module, load 2.19 instead 

2.19 is loaded effectively ... just to help old scripts 

 

This module will be deprecated soon!!!!


Thanks,


Best,

Melody



Melody Lu

sungduk@...

I have a same error message: MPT ERROR: invalid option -p  (HPE MPT 2.19  12/07/18 05:32:16).

 

The following is standard output:

Setting resource.RLIMIT_STACK to -1 from (-1, -1)

Generating namelists for /glade/work/sungduk/ENSO/cases_CESM2/test1

Creating component namelists

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/components/cam//cime_config/buildnml

CAM namelist copy: file1 /glade/work/sungduk/ENSO/cases_CESM2/test1/Buildconf/camconf/atm_in file2 /glade/scratch/sungduk/test1/run/atm_in

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/components/clm//cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/components/cice//cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/components/pop//cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/components/rtm//cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/cime/src/components/stub_comps/sglc/cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/cime/src/components/stub_comps/swav/cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/cime/src/components/stub_comps/sesp/cime_config/buildnml

   Calling /gpfs/fs1/work/sungduk/ENSO/CESM2.1.0/cime/src/drivers/mct/cime_config/buildnml

Finished creating component namelists

-------------------------------------------------------------------------

 - Prestage required restarts into /glade/scratch/sungduk/test1/run

 - Case input data directory (DIN_LOC_ROOT) is /glade/p/cesmdata/cseg/inputdata

 - Checking for required input datasets in DIN_LOC_ROOT

-------------------------------------------------------------------------

2019-03-10 16:38:29 MODEL EXECUTION BEGINS HERE

run command is mpiexec_mpt  -np 180 -p "%g:"  omplace -tm open64  /glade/scratch/sungduk/test1/bld/cesm.exe  >> cesm.log.$LID 2>&1

ERROR: RUN FAIL: Command 'mpiexec_mpt  -np 180 -p "%g:"  omplace -tm open64  /glade/scratch/sungduk/test1/bld/cesm.exe  >> cesm.log.$LID 2>&1 ' failed

See log file for details: /glade/scratch/sungduk/test1/run/cesm.log.4647813.chadmin1.190310-163825

sungduk@...

A quick update:

I erased "labelstdout" argument (-p "%g:") in env_mach_specific.xml, then the simulation was done without a problem. I guess HPE MPT version 2.19 does not support prefix_string (or use a different option flag for prefix_string). 

kezhoulumelody@...

Thanks !!

Melody Lu

jedwards

either remove the -p option from env_mach_specific.xml or reverse it's location in the file with the -np option

CESM Software Engineer

kezhoulumelody@...

Hi Jedwards,

This method works perfectly! Thank you so much!

Melody Lu

heyaqian1987@...

Also encounter same issue. Thanks for the solution!

Yaqian

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