I'm porting CESM2 with a new machine and i get an error when i run case.build.
It seems that something wrong with my compiler.But i have no idea.
Here is the complete log , my config_compiler.xml , config_machines.xml and system/software situation.
Thank you for any help!
[hg@ln01 test]$ ./case.build
Building case in directory /public/hg/peng/test
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
Calling /public/hg/peng/cesm/components/cam//cime_config/buildnml
...calling cam buildcpp to set build time options
CAM namelist copy: file1 /public/hg/peng/test/Buildconf/camconf/atm_in file2 /public/hg/peng/archive2/run/projects/test/run/atm_in
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/slnd/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sice/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/data_comps/docn/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/srof/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sglc/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/swav/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sesp/cime_config/buildnml
Calling /public/hg/peng/cesm/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /public/hg/peng/archive2/run/projects/test/bld/gptl.bldlog.181008-165311
Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.gptl
Component gptl build complete with 9 warnings
Building mct with output to file /public/hg/peng/archive2/run/projects/test/bld/mct.bldlog.181008-165311
Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.mct
Component mct build complete with 56 warnings
Building pio with output to file /public/hg/peng/archive2/run/projects/test/bld/pio.bldlog.181008-165311
Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.pio
Component pio build complete with 31 warnings
Building csm_share with output to file /public/hg/peng/archive2/run/projects/test/bld/csm_share.bldlog.181008-165311
Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.csm_share
Component csm_share build complete with 124 warnings
Building atm with output to /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311
Building lnd with output to /public/hg/peng/archive2/run/projects/test/bld/lnd.bldlog.181008-165311
Building ice with output to /public/hg/peng/archive2/run/projects/test/bld/ice.bldlog.181008-165311
Building ocn with output to /public/hg/peng/archive2/run/projects/test/bld/ocn.bldlog.181008-165311
Building rof with output to /public/hg/peng/archive2/run/projects/test/bld/rof.bldlog.181008-165311
Building glc with output to /public/hg/peng/archive2/run/projects/test/bld/glc.bldlog.181008-165311
Building wav with output to /public/hg/peng/archive2/run/projects/test/bld/wav.bldlog.181008-165311
Building esp with output to /public/hg/peng/archive2/run/projects/test/bld/esp.bldlog.181008-165311
Component lnd build complete with 1 warnings
Component wav build complete with 1 warnings
slnd built in 5.380197 seconds
swav built in 5.363935 seconds
Component rof build complete with 1 warnings
srof built in 5.427232 seconds
Component ice build complete with 1 warnings
sice built in 5.499429 seconds
Component esp build complete with 1 warnings
sesp built in 5.505163 seconds
Component glc build complete with 1 warnings
sglc built in 5.535266 seconds
Component ocn build complete with 3 warnings
docn built in 7.833208 seconds
/public/hg/peng/cesm/components/cam/src/dynamics/fv/par_vecsum.F90(107): error #6378: SUBROUTINE must be present on the end-subroutine-stmt of an internal or module subroutine
Component atm build complete with 235 warnings
cam built in 481.139815 seconds
ERROR: BUILD FAIL: cam.buildlib failed, cat /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311
It looks liike you are using an old version of gnu compilers. Please try updating to gnu 8.x or use another compiler. It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.
CESM Software Engineer
I'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6
I have no idea.
Thank you for any help!
[linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904
make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefile
make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfiles
cp -f Filepath Deppath
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends Deppath Srcfiles > Depends
make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; \
CC=mpicc CXX=mpicxx FC=mpif90 LDFLAGS="" cmake -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99 -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99 -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake" -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1
-- The C compiler identification is GNU 4.4.6
-- The Fortran compiler identification is GNU 4.4.6
-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc
-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90
-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90
-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes
-- Fortran compiler does not support c_sizeof function
-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so
-- Checking NetCDF version
-- Checking NetCDF version - 4.3.3.1
-- Checking whether NetCDF has parallel support
-- Checking whether NetCDF has parallel support - no
-- Looking for nc_set_log_level
-- Looking for nc_set_log_level - not found
-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a
-- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so
-- Checking PnetCDF version
-- Checking PnetCDF version - 1.9.0
-- MPIIO detected and enabled.
-- MPI Fortran module detected and enabled.
-- Configuring done
-- Generating done
-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1
make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
cat: Filepath: No such file or directory
cat: Srcfiles: No such file or directory
%file_modules
%file_includes
@check_includes
Building PIO with netcdf support
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_CXX_FLAGS
GPTL_PATH
PIO_ENABLE_TESTS
make -j 1
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/depend
make[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 2%] Generating pio_msg_getput_callbacks.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90
[ 5%] Generating pionfatt_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90
[ 7%] Generating pionfread_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90
[ 10%] Generating pionfwrite_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90
[ 12%] Generating pionfput_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90
[ 15%] Generating pionfget_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90
[ 17%] Generating alloc_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90
[ 20%] Generating box_rearrange.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90
[ 22%] Generating rearrange.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90
[ 25%] Generating iompi_mod.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90
[ 27%] Generating piodarray.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90
[ 30%] Generating pio_spmd_utils.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=
Scanning dependencies of target pio
make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requires
make[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU
/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.build
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.build
make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.o
cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -O -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1 -DLINUX -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.o
make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
character(len=:), allocatable :: myfname
1
Error: Syntax error in CHARACTER declaration at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
allocate(character(len=namelen) :: myfname)
1
Error: Syntax error in ALLOCATE statement at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
character(len=:), allocatable :: myfname
1
Error: Syntax error in CHARACTER declaration at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
allocate(character(len=namelen) :: myfname)
1
Error: Syntax error in ALLOCATE statement at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
myfname = trim(fname)
1
Error: Symbol 'myfname' at (1) has no IMPLICIT type
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
myfname = trim(fname)
1
Error: Symbol 'myfname' at (1) has no IMPLICIT type
make[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1
make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2
make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2
make: *** [all] Error 2
ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
character(len=:), allocatable :: myfname
1
Error: Syntax error in CHARACTER declaration at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
allocate(character(len=namelen) :: myfname)
1
Error: Syntax error in ALLOCATE statement at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
character(len=:), allocatable :: myfname
1
Error: Syntax error in CHARACTER declaration at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
allocate(character(len=namelen) :: myfname)
1
Error: Syntax error in ALLOCATE statement at (1)
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
myfname = trim(fname)
1
Error: Symbol 'myfname' at (1) has no IMPLICIT type
/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
myfname = trim(fname)
1
Error: Symbol 'myfname' at (1) has no IMPLICIT type
make[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1
make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2
make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2