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An error of CESM2 building

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zhouchunjiang@...
An error of CESM2 building

I'm porting CESM2 with a new machine and i get an error when i run case.build.

 

It seems that something wrong with my compiler.But i have no idea.

Here is the complete log , my config_compiler.xml , config_machines.xml and system/software situation.

Thank you for any help!

 

[hg@ln01 test]$ ./case.build 

Building case in directory /public/hg/peng/test

sharedlib_only is False

model_only is False

Generating component namelists as part of build

Creating component namelists

   Calling /public/hg/peng/cesm/components/cam//cime_config/buildnml

     ...calling cam buildcpp to set build time options

CAM namelist copy: file1 /public/hg/peng/test/Buildconf/camconf/atm_in file2 /public/hg/peng/archive2/run/projects/test/run/atm_in 

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/slnd/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sice/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/data_comps/docn/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/srof/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sglc/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/swav/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sesp/cime_config/buildnml

   Calling /public/hg/peng/cesm/cime/src/drivers/mct/cime_config/buildnml

Finished creating component namelists

Building gptl with output to file /public/hg/peng/archive2/run/projects/test/bld/gptl.bldlog.181008-165311

   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.gptl

Component gptl build complete with 9 warnings

Building mct with output to file /public/hg/peng/archive2/run/projects/test/bld/mct.bldlog.181008-165311

   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.mct

Component mct build complete with 56 warnings

Building pio with output to file /public/hg/peng/archive2/run/projects/test/bld/pio.bldlog.181008-165311

   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.pio

Component pio build complete with 31 warnings

Building csm_share with output to file /public/hg/peng/archive2/run/projects/test/bld/csm_share.bldlog.181008-165311

   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.csm_share

Component csm_share build complete with 124 warnings

Building atm with output to /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311

Building lnd with output to /public/hg/peng/archive2/run/projects/test/bld/lnd.bldlog.181008-165311

Building ice with output to /public/hg/peng/archive2/run/projects/test/bld/ice.bldlog.181008-165311

Building ocn with output to /public/hg/peng/archive2/run/projects/test/bld/ocn.bldlog.181008-165311

Building rof with output to /public/hg/peng/archive2/run/projects/test/bld/rof.bldlog.181008-165311

Building glc with output to /public/hg/peng/archive2/run/projects/test/bld/glc.bldlog.181008-165311

Building wav with output to /public/hg/peng/archive2/run/projects/test/bld/wav.bldlog.181008-165311

Building esp with output to /public/hg/peng/archive2/run/projects/test/bld/esp.bldlog.181008-165311

Component lnd build complete with 1 warnings

Component wav build complete with 1 warnings

slnd built in 5.380197 seconds

swav built in 5.363935 seconds

Component rof build complete with 1 warnings

srof built in 5.427232 seconds

Component ice build complete with 1 warnings

sice built in 5.499429 seconds

Component esp build complete with 1 warnings

sesp built in 5.505163 seconds

Component glc build complete with 1 warnings

sglc built in 5.535266 seconds

Component ocn build complete with 3 warnings

docn built in 7.833208 seconds

/public/hg/peng/cesm/components/cam/src/dynamics/fv/par_vecsum.F90(107): error #6378: SUBROUTINE must be present on the end-subroutine-stmt of an internal or module subroutine

 

Component atm build complete with 235 warnings

cam built in 481.139815 seconds

ERROR: BUILD FAIL: cam.buildlib failed, cat /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311

jedwards

It looks liike you are using an old version of gnu compilers.  Please try updating to gnu 8.x or use another compiler.   It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.

CESM Software Engineer

linxf@...
An error of CESM2 building

I'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6

I have no idea.

Thank you for any help!

[linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904

make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefile

make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfiles

cp -f Filepath Deppath

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends  Deppath Srcfiles > Depends

make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; \

CC=mpicc   CXX=mpicxx  FC=mpif90  LDFLAGS="" cmake  -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake"  -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90  /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1

-- The C compiler identification is GNU 4.4.6

-- The Fortran compiler identification is GNU 4.4.6

-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc

-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works

-- Detecting C compiler ABI info

-- Detecting C compiler ABI info - done

-- Detecting C compile features

-- Detecting C compile features - done

-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90

-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -- works

-- Detecting Fortran compiler ABI info

-- Detecting Fortran compiler ABI info - done

-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90

-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes

-- Fortran compiler does not support c_sizeof function

-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so  

-- Checking NetCDF version

-- Checking NetCDF version - 4.3.3.1

-- Checking whether NetCDF has parallel support

-- Checking whether NetCDF has parallel support - no

-- Looking for nc_set_log_level

-- Looking for nc_set_log_level - not found

-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a  

-- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so  

-- Checking PnetCDF version

-- Checking PnetCDF version - 1.9.0

-- MPIIO detected and enabled.

-- MPI Fortran module detected and enabled.

-- Configuring done

-- Generating done

-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1

make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

cat: Filepath: No such file or directory

cat: Srcfiles: No such file or directory

%file_modules

%file_includes

@check_includes


Building PIO with netcdf support 

CMake Warning:

  Manually-specified variables were not used by the project:


    CMAKE_CXX_FLAGS

    GPTL_PATH

    PIO_ENABLE_TESTS

make -j 1

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marks

make -f CMakeFiles/Makefile2 all

make[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/depend

make[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[  2%] Generating pio_msg_getput_callbacks.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90

[  5%] Generating pionfatt_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90

[  7%] Generating pionfread_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90

[ 10%] Generating pionfwrite_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90

[ 12%] Generating pionfput_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90

[ 15%] Generating pionfget_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90

[ 17%] Generating alloc_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90

[ 20%] Generating box_rearrange.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90

[ 22%] Generating rearrange.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90

[ 25%] Generating iompi_mod.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90

[ 27%] Generating piodarray.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90

[ 30%] Generating pio_spmd_utils.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=

Scanning dependencies of target pio

make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requires

make[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU

/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.build

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.build

make[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.o

cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.o

make[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:


    character(len=:), allocatable  :: myfname

                  1

Error: Syntax error in CHARACTER declaration at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:


       allocate(character(len=namelen) :: myfname)

                         1

Error: Syntax error in ALLOCATE statement at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:


    character(len=:), allocatable :: myfname

                  1

Error: Syntax error in CHARACTER declaration at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:


       allocate(character(len=namelen) :: myfname)

                         1

Error: Syntax error in ALLOCATE statement at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:


       myfname = trim(fname)

              1

Error: Symbol 'myfname' at (1) has no IMPLICIT type

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:


       myfname = trim(fname)

              1

Error: Symbol 'myfname' at (1) has no IMPLICIT type

make[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1

make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2

make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2

make: *** [all] Error 2

ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:


    character(len=:), allocatable  :: myfname

                  1

Error: Syntax error in CHARACTER declaration at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:


       allocate(character(len=namelen) :: myfname)

                         1

Error: Syntax error in ALLOCATE statement at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:


    character(len=:), allocatable :: myfname

                  1

Error: Syntax error in CHARACTER declaration at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:


       allocate(character(len=namelen) :: myfname)

                         1

Error: Syntax error in ALLOCATE statement at (1)

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:


       myfname = trim(fname)

              1

Error: Symbol 'myfname' at (1) has no IMPLICIT type

/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:


       myfname = trim(fname)

              1

Error: Symbol 'myfname' at (1) has no IMPLICIT type

make[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1

make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2

make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2

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