Hello,
I have tried to setup CESM2.1.1 on our cluster machine and struggling for PIO build up issue. It is hard for me to know what is wrong from the below log message. I also copy config_machine.xml below the log. Could you advice me what I am missing or where I should...
Hi there, I've successfully built CESM2.1.0 with the compset of FHIST, but I met a problem in the beginning of the run, here's the error log:" Opened existing file /home/luom/apps/cesm2.1.0/inputdata/atm/cam/chem/emis/elev/H2OemissionCH4oxidat ionx2_3D_L70_1849-2015_CMIP6ensAvg_c180927.nc ...
Hi Jedwards:I would like to conduct high-resolution seasonal simulations driven by prescribed SST (F2000 configuration).However, the CESM2 seems to only support 0.9*1.25 degree grid spacing...When I typed source /opt/apps/lmod/lmod/init/cshit shows...-bash: setenv: command notfound-bash...
Hi,Thanks for your reply. Below shows the complete end of cesm.log: Opened existing file b40.1850.track1.2deg.003.cam.r.0501-01-01-00000.nc 65536 NetCDF: Attribute notfound NetCDF: Attribute notfound WARNING: Rearr optional argument is a pio2 feature, ignored in pio1 WARNING: Rearr...
These netcdf messages are not model errors - they only indicate that a variable was notfound on the input file. If the variable was required there would be an additional abort message. Is this the end of the cesm.log or is there more to follow? If you can't find the correct source of the...
Dear Edward, I agree with you that probably the problem is the stack size limit. The problem is that when I run the cesm1.2 model I place a command: limit stacksize unlimited in the file that I submit to the queue system. But, now in cesm2 where do I have to place that command ?Thank very...
Hear you have a copy of the cesm log file. The only pourpose of the this simulation is to test whether the compilation run or not. What compset do you advice me to use to test the compilation ?Cheers Agustin Invalid PIO rearranger comm max pend req (comp2io), 0
Resetting PIO...
Hi Erik,Thanks for the reply. I can not make it work.When I try source env_mach_specific, it gives this error:PNETCDF: Undefined variable.
I provided the following path for PNETCDF: setenv PNETCDF /glade/u/apps/ch/opt/pnetcdf/1.8.0/mpt/2.15/intel/17.0.1/lib
When I run gmake after this it gives...
Hi Erik,Thanks for the reply. I can not make it work.When I try source env_mach_specific, it gives this error:PNETCDF: Undefined variable.
I provided the following path for PNETCDF: setenv PNETCDF /glade/u/apps/ch/opt/pnetcdf/1.8.0/mpt/2.15/intel/17.0.1/lib
When I run gmake after this it gives...
Hi Erik,Thanks for the reply. I can not make it work.When I try source env_mach_specific, it gives this error:PNETCDF: Undefined variable.
I provided the following path for PNETCDF: setenv PNETCDF /glade/u/apps/ch/opt/pnetcdf/1.8.0/mpt/2.15/intel/17.0.1/lib
When I run gmake after this it gives...
Hi, I am trying to run CLM5 on my institute's cluster but I encountered a problem when trying to invoke case.build.This is the error messages when running case.build:
Building case in directory /users/student/$HOME/CLM/clm5.0/test50sharedlib_only is Falsemodel_only is FalseGenerating component...
I tried to generate a regional dataset for a single-point simulation on NERSC's edison.Following the workflow of https://ncar.github.io/CLM/doc/build/html/users_guide/using-clm-tools/creating-surface-datasets.html?highlight=gen_domain, I get to the step of compile gen_domain. So I follow the...
Hi everyone,I am trying to switch from CAM4 to CAM5. I have managed to run the the E_1850_CAM5_CN compset fine at f19_g16. At the 1 deg resolution (f09_g16) I run into segmentation errors though during the initial stages of the simulation.Please find the log outptut below:...
Opened existing...
Hi,I am running the cesm with the nudging capability to a reanalysis data set.The nudging capability is realized by some source code and some nudge-related namelist variables.The souce code is placed in the src.cam folder and the namelist variables are in user_n_cam.When I tried to preview the...
Hi, everyone. Recently i have also tried to make a regional surface data with transient pfts from 1850 to 2100 using the mksurfdata.pl with the command "./mksurfdata.pl -r usrspec -usr_gname $GRIDNAME -usr_gdate 160929 -y 1850-2000 -dynpft "pftdyn_hist_simyr1850-2005_sliu.txt" ". The target...
Hi,I am trying to build CESM on my laptop (MacOSX El Capitan). I have encountered an error with building buildlib.mct. This seems to be a common error message, but I have not been able to resolve the issue via suggestions for any other post I found. If anyone has any ideas for me to try, that...
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