scripts

  1. J

    DATA_ASSIMILATION_SCRIPT in CESM/DART fails with "Bad fd number" when using tcsh

    Dear all, I am trying to run DART data assimilation within CESM on Ubuntu 22.04, but I encounter a shell error when specifying a tcsh assimilation script. When I run ./case.submit , I get: Running /root/cases/fwscdart/assimilate.csh /bin/sh: 1: Syntax error: Bad fd number ERROR...
  2. W

    Mpirun and Job Submission Errors

    Hi there, I am currently encountering issues while running a case with CESM2.3.alpha17. The problems involve an mpirun error, along with the messages "Submitted job case.run with id None" and "Submitted job case.st_archive with id None". I have attached the cesm.log file, other relevant case...
  3. Jerry

    Error when testing nudging tools in CESM2.1.3

    Hi, everyone! I try to test the nudging tools in directory 'components/cam/tools/nudging/Gen_Data/'. And I chose ERAI as the target reanalysis product. I edited the csh script according to the instructions in the README file and submitted it for execution. Unfortunately, there was an error. I...
  4. J

    Workflow for handling (A)MOC data from CESM2-LENS

    Hi all! I was wondering if there is an example workflow or script for handling the NetCDF files of the MOC data of the CESM2 large ensemble. I run into problems when trying to use CDOs and am a bit confused by the amount of variables and how to isolate the AMOC and calculating the AMOC index or...
  5. H

    Redirect output after job submission

    I have ported CESM to Clemson University's supercomputer Palmetto following the porting instruction, and I am considering making full use of Palmetto to get better performance. Palmetto differs from other supercomputers that two different types of scratch systems are connected to each node. One...
  6. J

    Cheyenne update module issues for all CESM versions

    Due to the cheyenne maintenance this week you need to update some modules:intel/17.0.1pnetcdf/1.11.0netcdf/4.6.1netcdf-mpi/4.6.1mpt/2.19 There is also an issue with the -p option to mpiexec_mpt, you may either reverse the order of -p and -np in env_mach_specific.xml or remove the -p option.  If...
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