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An error of CESM2 building

Z

zhouchunjiang@mail_iap_ac_cn

New Member
I'm porting CESM2 with a new machine and i get an error when i run case.build. It seems that something wrong with my compiler.But i have no idea.Here is the complete log , my config_compiler.xml , config_machines.xml and system/software situation.Thank you for any help! [hg@ln01 test]$ ./case.build Building case in directory /public/hg/peng/testsharedlib_only is Falsemodel_only is FalseGenerating component namelists as part of buildCreating component namelists   Calling /public/hg/peng/cesm/components/cam//cime_config/buildnml     ...calling cam buildcpp to set build time optionsCAM namelist copy: file1 /public/hg/peng/test/Buildconf/camconf/atm_in file2 /public/hg/peng/archive2/run/projects/test/run/atm_in    Calling /public/hg/peng/cesm/cime/src/components/stub_comps/slnd/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sice/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/data_comps/docn/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/srof/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sglc/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/swav/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/components/stub_comps/sesp/cime_config/buildnml   Calling /public/hg/peng/cesm/cime/src/drivers/mct/cime_config/buildnmlFinished creating component namelistsBuilding gptl with output to file /public/hg/peng/archive2/run/projects/test/bld/gptl.bldlog.181008-165311   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.gptlComponent gptl build complete with 9 warningsBuilding mct with output to file /public/hg/peng/archive2/run/projects/test/bld/mct.bldlog.181008-165311   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.mctComponent mct build complete with 56 warningsBuilding pio with output to file /public/hg/peng/archive2/run/projects/test/bld/pio.bldlog.181008-165311   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.pioComponent pio build complete with 31 warningsBuilding csm_share with output to file /public/hg/peng/archive2/run/projects/test/bld/csm_share.bldlog.181008-165311   Calling /public/hg/peng/cesm/cime/src/build_scripts/buildlib.csm_shareComponent csm_share build complete with 124 warningsBuilding atm with output to /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311Building lnd with output to /public/hg/peng/archive2/run/projects/test/bld/lnd.bldlog.181008-165311Building ice with output to /public/hg/peng/archive2/run/projects/test/bld/ice.bldlog.181008-165311Building ocn with output to /public/hg/peng/archive2/run/projects/test/bld/ocn.bldlog.181008-165311Building rof with output to /public/hg/peng/archive2/run/projects/test/bld/rof.bldlog.181008-165311Building glc with output to /public/hg/peng/archive2/run/projects/test/bld/glc.bldlog.181008-165311Building wav with output to /public/hg/peng/archive2/run/projects/test/bld/wav.bldlog.181008-165311Building esp with output to /public/hg/peng/archive2/run/projects/test/bld/esp.bldlog.181008-165311Component lnd build complete with 1 warningsComponent wav build complete with 1 warningsslnd built in 5.380197 secondsswav built in 5.363935 secondsComponent rof build complete with 1 warningssrof built in 5.427232 secondsComponent ice build complete with 1 warningssice built in 5.499429 secondsComponent esp build complete with 1 warningssesp built in 5.505163 secondsComponent glc build complete with 1 warningssglc built in 5.535266 secondsComponent ocn build complete with 3 warningsdocn built in 7.833208 seconds/public/hg/peng/cesm/components/cam/src/dynamics/fv/par_vecsum.F90(107): error #6378: SUBROUTINE must be present on the end-subroutine-stmt of an internal or module subroutine Component atm build complete with 235 warningscam built in 481.139815 secondsERROR: BUILD FAIL: cam.buildlib failed, cat /public/hg/peng/archive2/run/projects/test/bld/atm.bldlog.181008-165311
 
J

jedwards

CSEG and Liaisons
Staff member
It looks liike you are using an old version of gnu compilers.  Please try updating to gnu 8.x or use another compiler.   It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.
 
J

jedwards

CSEG and Liaisons
Staff member
It looks liike you are using an old version of gnu compilers.  Please try updating to gnu 8.x or use another compiler.   It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.
 
J

jedwards

CSEG and Liaisons
Staff member
It looks liike you are using an old version of gnu compilers.  Please try updating to gnu 8.x or use another compiler.   It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.
 
J

jedwards

CSEG and Liaisons
Staff member
It looks liike you are using an old version of gnu compilers.  Please try updating to gnu 8.x or use another compiler.   It also looks like you are mixing a build with gnu and a netcdf library built with intel - that's not going to work either.
 
L

linxf@lreis_ac_cn

New Member
An error of CESM2 buildingI'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6I have no idea.Thank you for any help![linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefilemake: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfilescp -f Filepath Deppath/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends  Deppath Srcfiles > Dependsmake: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; CC=mpicc   CXX=mpicxx  FC=mpif90  LDFLAGS="" cmake  -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake"  -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90  /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1-- The C compiler identification is GNU 4.4.6-- The Fortran compiler identification is GNU 4.4.6-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Detecting C compile features-- Detecting C compile features - done-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -- works-- Detecting Fortran compiler ABI info-- Detecting Fortran compiler ABI info - done-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes-- Fortran compiler does not support c_sizeof function-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so  -- Checking NetCDF version-- Checking NetCDF version - 4.3.3.1-- Checking whether NetCDF has parallel support-- Checking whether NetCDF has parallel support - no-- Looking for nc_set_log_level-- Looking for nc_set_log_level - not found-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a  -- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so  -- Checking PnetCDF version-- Checking PnetCDF version - 1.9.0-- MPIIO detected and enabled.-- MPI Fortran module detected and enabled.-- Configuring done-- Generating done-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cat: Filepath: No such file or directorycat: Srcfiles: No such file or directory%file_modules%file_includes@check_includes
Building PIO with netcdf support CMake Warning:  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS    GPTL_PATH    PIO_ENABLE_TESTSmake -j 1/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marksmake -f CMakeFiles/Makefile2 allmake[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/dependmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[  2%] Generating pio_msg_getput_callbacks.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90[  5%] Generating pionfatt_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90[  7%] Generating pionfread_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90[ 10%] Generating pionfwrite_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90[ 12%] Generating pionfput_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90[ 15%] Generating pionfget_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90[ 17%] Generating alloc_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90[ 20%] Generating box_rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90[ 22%] Generating rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90[ 25%] Generating iompi_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90[ 27%] Generating piodarray.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90[ 30%] Generating pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=Scanning dependencies of target piomake[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requiresmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.omake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2make: *** [all] Error 2ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2
 
L

linxf@lreis_ac_cn

New Member
An error of CESM2 buildingI'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6I have no idea.Thank you for any help![linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefilemake: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfilescp -f Filepath Deppath/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends  Deppath Srcfiles > Dependsmake: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; CC=mpicc   CXX=mpicxx  FC=mpif90  LDFLAGS="" cmake  -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake"  -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90  /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1-- The C compiler identification is GNU 4.4.6-- The Fortran compiler identification is GNU 4.4.6-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Detecting C compile features-- Detecting C compile features - done-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -- works-- Detecting Fortran compiler ABI info-- Detecting Fortran compiler ABI info - done-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes-- Fortran compiler does not support c_sizeof function-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so  -- Checking NetCDF version-- Checking NetCDF version - 4.3.3.1-- Checking whether NetCDF has parallel support-- Checking whether NetCDF has parallel support - no-- Looking for nc_set_log_level-- Looking for nc_set_log_level - not found-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a  -- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so  -- Checking PnetCDF version-- Checking PnetCDF version - 1.9.0-- MPIIO detected and enabled.-- MPI Fortran module detected and enabled.-- Configuring done-- Generating done-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cat: Filepath: No such file or directorycat: Srcfiles: No such file or directory%file_modules%file_includes@check_includes
Building PIO with netcdf support CMake Warning:  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS    GPTL_PATH    PIO_ENABLE_TESTSmake -j 1/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marksmake -f CMakeFiles/Makefile2 allmake[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/dependmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[  2%] Generating pio_msg_getput_callbacks.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90[  5%] Generating pionfatt_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90[  7%] Generating pionfread_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90[ 10%] Generating pionfwrite_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90[ 12%] Generating pionfput_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90[ 15%] Generating pionfget_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90[ 17%] Generating alloc_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90[ 20%] Generating box_rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90[ 22%] Generating rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90[ 25%] Generating iompi_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90[ 27%] Generating piodarray.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90[ 30%] Generating pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=Scanning dependencies of target piomake[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requiresmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.omake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2make: *** [all] Error 2ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2
 
L

linxf@lreis_ac_cn

New Member
An error of CESM2 buildingI'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6I have no idea.Thank you for any help![linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefilemake: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfilescp -f Filepath Deppath/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends  Deppath Srcfiles > Dependsmake: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; CC=mpicc   CXX=mpicxx  FC=mpif90  LDFLAGS="" cmake  -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake"  -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90  /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1-- The C compiler identification is GNU 4.4.6-- The Fortran compiler identification is GNU 4.4.6-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Detecting C compile features-- Detecting C compile features - done-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -- works-- Detecting Fortran compiler ABI info-- Detecting Fortran compiler ABI info - done-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes-- Fortran compiler does not support c_sizeof function-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so  -- Checking NetCDF version-- Checking NetCDF version - 4.3.3.1-- Checking whether NetCDF has parallel support-- Checking whether NetCDF has parallel support - no-- Looking for nc_set_log_level-- Looking for nc_set_log_level - not found-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a  -- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so  -- Checking PnetCDF version-- Checking PnetCDF version - 1.9.0-- MPIIO detected and enabled.-- MPI Fortran module detected and enabled.-- Configuring done-- Generating done-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cat: Filepath: No such file or directorycat: Srcfiles: No such file or directory%file_modules%file_includes@check_includes
Building PIO with netcdf support CMake Warning:  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS    GPTL_PATH    PIO_ENABLE_TESTSmake -j 1/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marksmake -f CMakeFiles/Makefile2 allmake[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/dependmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[  2%] Generating pio_msg_getput_callbacks.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90[  5%] Generating pionfatt_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90[  7%] Generating pionfread_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90[ 10%] Generating pionfwrite_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90[ 12%] Generating pionfput_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90[ 15%] Generating pionfget_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90[ 17%] Generating alloc_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90[ 20%] Generating box_rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90[ 22%] Generating rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90[ 25%] Generating iompi_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90[ 27%] Generating piodarray.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90[ 30%] Generating pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=Scanning dependencies of target piomake[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requiresmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.omake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2make: *** [all] Error 2ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2
 
L

linxf@lreis_ac_cn

New Member
An error of CESM2 buildingI'm porting CESM2 with a new machine and i get an error when i run case.build. The gnu compiler version is 4.4.6I have no idea.Thank you for any help![linxf@login03 shinstall]$ cat /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/pio.bldlog.181009-225904make /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/Makefile -C /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASEROOT=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test MODEL=pio1 USER_CMAKE_OPTS="-D GENF90_PATH=$CIMEROOT/src/externals/genf90 " PIO_LIBDIR=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 CASETOOLS=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools PIO_VERSION=1 MPILIB=mpich SHAREDLIBROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio EXEROOT=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld COMPILER=gnu BUILD_THREADED=False USER_CPPDEFS=-DTIMING -f /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/Makefilemake: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkSrcfilescp -f Filepath Deppath/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/scripts/b.e20.B1850.f19_g17.test/Tools/mkDepends  Deppath Srcfiles > Dependsmake: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1; CC=mpicc   CXX=mpicxx  FC=mpif90  LDFLAGS="" cmake  -D CMAKE_Fortran_FLAGS:STRING="-fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_C_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_CXX_FLAGS:STRING="-std=gnu99   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include" -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON -D GPTL_PATH:STRING=/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads -D PIO_ENABLE_TESTS:BOOL=OFF -D USER_CMAKE_MODULE_PATH:LIST="/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/CMake;/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio2/cmake"  -D NetCDF_PATH:PATH=/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1 -D PnetCDF_PATH:STRING="/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0" -D GENF90_PATH=/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90  /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1-- The C compiler identification is GNU 4.4.6-- The Fortran compiler identification is GNU 4.4.6-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc-- Check for working C compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpicc -- works-- Detecting C compiler ABI info-- Detecting C compiler ABI info - done-- Detecting C compile features-- Detecting C compile features - done-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90-- Check for working Fortran compiler: /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -- works-- Detecting Fortran compiler ABI info-- Detecting Fortran compiler ABI info - done-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90-- Checking whether /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90 supports Fortran 90 -- yes-- Fortran compiler does not support c_sizeof function-- Found NetCDF_C: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdf.so  -- Checking NetCDF version-- Checking NetCDF version - 4.3.3.1-- Checking whether NetCDF has parallel support-- Checking whether NetCDF has parallel support - no-- Looking for nc_set_log_level-- Looking for nc_set_log_level - not found-- Found NetCDF_Fortran: /wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/lib/libnetcdff.a  -- Found PnetCDF_Fortran: /wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/lib/libpnetcdf.so  -- Checking PnetCDF version-- Checking PnetCDF version - 1.9.0-- MPIIO detected and enabled.-- MPI Fortran module detected and enabled.-- Configuring done-- Generating done-- Build files have been written to: /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1make: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'cat: Filepath: No such file or directorycat: Srcfiles: No such file or directory%file_modules%file_includes@check_includes
Building PIO with netcdf support CMake Warning:  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS    GPTL_PATH    PIO_ENABLE_TESTSmake -j 1/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -H/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 -B/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 --check-build-system CMakeFiles/Makefile.cmake 0/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_progress_start /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/CMakeFiles/progress.marksmake -f CMakeFiles/Makefile2 allmake[1]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/dependmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[  2%] Generating pio_msg_getput_callbacks.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_getput_callbacks.F90.in > pio_msg_getput_callbacks.F90[  5%] Generating pionfatt_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfatt_mod.F90.in > pionfatt_mod.F90[  7%] Generating pionfread_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfread_mod.F90.in > pionfread_mod.F90[ 10%] Generating pionfwrite_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfwrite_mod.F90.in > pionfwrite_mod.F90[ 12%] Generating pionfput_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfput_mod.F90.in > pionfput_mod.F90[ 15%] Generating pionfget_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pionfget_mod.F90.in > pionfget_mod.F90[ 17%] Generating alloc_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/alloc_mod.F90.in > alloc_mod.F90[ 20%] Generating box_rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/box_rearrange.F90.in > box_rearrange.F90[ 22%] Generating rearrange.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/rearrange.F90.in > rearrange.F90[ 25%] Generating iompi_mod.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/iompi_mod.F90.in > iompi_mod.F90[ 27%] Generating piodarray.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piodarray.F90.in > piodarray.F90[ 30%] Generating pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/genf90/genf90.pl /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_spmd_utils.F90.in > pio_spmd_utils.F90cd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 && /wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_depends "Unix Makefiles" /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1 /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1 /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/CMakeFiles/pio.dir/DependInfo.cmake --color=Scanning dependencies of target piomake[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/requiresmake[2]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 32%] Building Fortran object pio/CMakeFiles/pio.dir/pio_kinds.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_kinds.F90 -o CMakeFiles/pio.dir/pio_kinds.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_kinds pio/CMakeFiles/pio.dir/pio_kinds.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_kinds.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 35%] Building Fortran object pio/CMakeFiles/pio.dir/pio_support.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_support.F90 -o CMakeFiles/pio.dir/pio_support.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_support pio/CMakeFiles/pio.dir/pio_support.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_support.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 37%] Building Fortran object pio/CMakeFiles/pio.dir/pio_types.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_types.F90 -o CMakeFiles/pio.dir/pio_types.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_types pio/CMakeFiles/pio.dir/pio_types.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_types.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 40%] Building Fortran object pio/CMakeFiles/pio.dir/calcdecomp.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdecomp.F90 -o CMakeFiles/pio.dir/calcdecomp.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdecomp pio/CMakeFiles/pio.dir/calcdecomp.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdecomp.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 42%] Building Fortran object pio/CMakeFiles/pio.dir/alloc_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/alloc_mod.F90 -o CMakeFiles/pio.dir/alloc_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/alloc_mod pio/CMakeFiles/pio.dir/alloc_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/alloc_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 45%] Building Fortran object pio/CMakeFiles/pio.dir/pio_msg_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_msg_mod.F90 -o CMakeFiles/pio.dir/pio_msg_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_msg_mod pio/CMakeFiles/pio.dir/pio_msg_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_msg_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 47%] Building Fortran object pio/CMakeFiles/pio.dir/pio_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_utils.F90 -o CMakeFiles/pio.dir/pio_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_utils pio/CMakeFiles/pio.dir/pio_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 50%] Building Fortran object pio/CMakeFiles/pio.dir/nf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/nf_mod.F90 -o CMakeFiles/pio.dir/nf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/nf_mod pio/CMakeFiles/pio.dir/nf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/nf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 52%] Building Fortran object pio/CMakeFiles/pio.dir/iompi_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/iompi_mod.F90 -o CMakeFiles/pio.dir/iompi_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/iompi_mod pio/CMakeFiles/pio.dir/iompi_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/iompi_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 55%] Building Fortran object pio/CMakeFiles/pio.dir/pionfread_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfread_mod.F90 -o CMakeFiles/pio.dir/pionfread_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfread_mod pio/CMakeFiles/pio.dir/pionfread_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfread_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 57%] Building Fortran object pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pionfwrite_mod.F90 -o CMakeFiles/pio.dir/pionfwrite_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pionfwrite_mod pio/CMakeFiles/pio.dir/pionfwrite_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pionfwrite_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 60%] Building Fortran object pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/calcdisplace_mod.F90 -o CMakeFiles/pio.dir/calcdisplace_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/calcdisplace_mod pio/CMakeFiles/pio.dir/calcdisplace_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/calcdisplace_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 62%] Building Fortran object pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/pio_spmd_utils.F90 -o CMakeFiles/pio.dir/pio_spmd_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_spmd_utils pio/CMakeFiles/pio.dir/pio_spmd_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_spmd_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 65%] Building Fortran object pio/CMakeFiles/pio.dir/box_rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/box_rearrange.F90 -o CMakeFiles/pio.dir/box_rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/box_rearrange pio/CMakeFiles/pio.dir/box_rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/box_rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 67%] Building Fortran object pio/CMakeFiles/pio.dir/rearrange.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/rearrange.F90 -o CMakeFiles/pio.dir/rearrange.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/rearrange pio/CMakeFiles/pio.dir/rearrange.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/rearrange.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 70%] Building Fortran object pio/CMakeFiles/pio.dir/piodarray.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio/piodarray.F90 -o CMakeFiles/pio.dir/piodarray.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/piodarray pio/CMakeFiles/pio.dir/piodarray.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/piodarray.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 72%] Building Fortran object pio/CMakeFiles/pio.dir/ionf_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/ionf_mod.F90 -o CMakeFiles/pio.dir/ionf_mod.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/ionf_mod pio/CMakeFiles/pio.dir/ionf_mod.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/ionf_mod.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 75%] Building Fortran object pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/pio_mpi_utils.F90 -o CMakeFiles/pio.dir/pio_mpi_utils.F90.o/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E cmake_copy_f90_mod pio/pio_mpi_utils pio/CMakeFiles/pio.dir/pio_mpi_utils.mod.stamp GNU/wps/home/linxf/CLM/CLM4.5_install/software/cmake-3.4.1/bin/cmake -E touch pio/CMakeFiles/pio.dir/pio_mpi_utils.F90.o.provides.buildmake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make -f pio/CMakeFiles/pio.dir/build.make pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides.buildmake[3]: Entering directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'[ 77%] Building Fortran object pio/CMakeFiles/pio.dir/piolib_mod.F90.ocd /wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio && /wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/bin/mpif90  -DNO_C_SIZEOF -DUSEMPIIO -D_NETCDF -D_NOUSEMCT -D_PNETCDF -D_USEBOX -I/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1/pio -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include  -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none   -O  -DTIMING -DLINUX -DNDEBUG -DHAVE_MPI -DPIO1  -DLINUX   -DFORTRANUNDERSCORE -DNO_R16 -DCPRGNU -DHAVE_SLASHPROC -D_NO_MPI_RSEND -I. -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/mct/noesmf/c1a1l1i1o1r1g1w1e1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/netcdf-4.3.3.1/include -I/wps/home/linxf/CLM/CLM4.5_install/software/mpich-3.1.1/include -I/wps/home/linxf/CLM/CLM5.0_install/software/parallel-netcdf-1.9.0/include -I/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/include -ffree-line-length-none   -c /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90 -o CMakeFiles/pio.dir/piolib_mod.F90.omake[3]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[2]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'make[1]: Leaving directory `/wps/home/linxf/CLM/cesm_outdata/cesm2_0_0/b.e20.B1850.f19_g17.test/bld/gnu/mpich/nodebug/nothreads/pio/pio1'/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2make: *** [all] Error 2ERROR: /wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2579.18:
    character(len=:), allocatable  :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2608.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2749.18:
    character(len=:), allocatable :: myfname                  1Error: Syntax error in CHARACTER declaration at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2797.25:
       allocate(character(len=namelen) :: myfname)                         1Error: Syntax error in ALLOCATE statement at (1)/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2799.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT type/wps/home/linxf/CLM/cesm_code/cesm2_0_0/cime/src/externals/pio1/pio/piolib_mod.F90:2610.14:
       myfname = trim(fname)              1Error: Symbol 'myfname' at (1) has no IMPLICIT typemake[3]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o] Error 1make[2]: *** [pio/CMakeFiles/pio.dir/piolib_mod.F90.o.provides] Error 2make[1]: *** [pio/CMakeFiles/pio.dir/all] Error 2
 
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