Build error on Derecho machine

[taoliu_tech]

I am trying to run the CESM 2023 tutorial code here. I followed the step by step and I received an error in the ./case.build step.

sesp built in 4.448607 seconds
cism built in 31.182067 seconds
mosart built in 69.226324 seconds
ww built in 79.504146 seconds
Component ocn build complete with 13 warnings
pop built in 160.842726 seconds
Component ice build complete with 1 warnings
cice built in 177.274250 seconds
Component atm build complete with 14 warnings
cam built in 178.620981 seconds
ERROR: BUILD FAIL: cism.buildlib failed, cat /glade/derecho/scratch/taoliu/my.b.day1.0/bld/glc.bldlog.231010-193221

The /glade/derecho/scratch/taoliu/my.b.day1.0/bld/glc.bldlog.231010-193221 file is attached. Could I get any help to solve this error?


taoliu@derecho3:/glade/work/taoliu/code/my_cesm_code> ./describe_version
------------------------------------------------------------------------
git describe:
release-cesm2.1.4-0-g4003996
------------------------------------------------------------------------

------------------------------------------------------------------------
git status:
HEAD detached at release-cesm2.1.4
nothing to commit, working tree clean
------------------------------------------------------------------------

------------------------------------------------------------------------
manage_externals status:
Processing externals description file : Externals.cfg (/glade/work/taoliu/code/my_cesm_code)
Processing externals description file : Externals_CAM.cfg (/glade/work/taoliu/code/my_cesm_code/components/cam)
Processing externals description file : Externals_CISM.cfg (/glade/work/taoliu/code/my_cesm_code/components/cism)
Processing externals description file : Externals_CLM.cfg (/glade/work/taoliu/code/my_cesm_code/components/clm)
Processing externals description file : Externals_POP.cfg (/glade/work/taoliu/code/my_cesm_code/components/pop)
Checking local status of required & optional components: cam, chem_proc, carma, clubb, cosp2, cice, cime, cism, source_cism, clm, fates, ptclm, mosart, pop, cvmix, marbl, rtm, ww3,
./cime
clean sandbox, on cime5.6.44
HEAD detached at cime5.6.44
nothing to commit, working tree clean

./components/cam
clean sandbox, on cam_cesm2_1_rel_r58
HEAD detached at cam_cesm2_1_rel_r58
Untracked files:
(use "git add <file>..." to include in what will be committed)
cime_config/__pycache__/

nothing added to commit but untracked files present (use "git add" to track)

./components/cam/chem_proc
clean sandbox, on tools/proc_atm/chem_proc/release_tags/chem_proc5_0_03_rel

./components/cam/src/physics/carma/base
clean sandbox, on carma/release_tags/carma3_49_rel

./components/cam/src/physics/clubb
clean sandbox, on vendor_clubb_r8099_n03
HEAD detached at vendor_clubb_r8099_n03
nothing to commit, working tree clean

./components/cam/src/physics/cosp2/src
clean sandbox, on CFMIP/COSPv2.0/tags/v2.1.4cesm/src

./components/cice
clean sandbox, on cice5_cesm2_1_1_20190321
HEAD detached at cice5_cesm2_1_1_20190321
Untracked files:
(use "git add <file>..." to include in what will be committed)
cime_config/__pycache__/
cime_config/buildcppc
cime_config/buildnmlc

nothing added to commit but untracked files present (use "git add" to track)

./components/cism
clean sandbox, on cism-release-cesm2.1.2_02
HEAD detached at cism-release-cesm2.1.2_02
nothing to commit, working tree clean

./components/cism/source_cism
clean sandbox, on release-cism2.1.03
HEAD detached at release-cism2.1.03
nothing to commit, working tree clean

./components/clm
clean sandbox, on release-clm5.0.35
HEAD detached at release-clm5.0.35
nothing to commit, working tree clean

./components/clm/src/fates
clean sandbox, on sci.1.30.0_api.8.0.0
HEAD detached at sci.1.30.0_api.8.0.0
nothing to commit, working tree clean

./components/clm/tools/PTCLM
clean sandbox, on PTCLM2_20200902
HEAD detached at PTCLM2_20200902
nothing to commit, working tree clean

./components/mosart
clean sandbox, on release-cesm2.0.04
HEAD detached at release-cesm2.0.04
Untracked files:
(use "git add <file>..." to include in what will be committed)
cime_config/__pycache__/

nothing added to commit but untracked files present (use "git add" to track)

./components/pop
clean sandbox, on pop2_cesm2_1_rel_n14
HEAD detached at pop2_cesm2_1_rel_n14
nothing to commit, working tree clean

./components/pop/externals/CVMix
clean sandbox, on v0.93-beta
HEAD detached at v0.93-beta
nothing to commit, working tree clean

./components/pop/externals/MARBL
clean sandbox, on cesm2.1-n00
HEAD detached at cesm2.1-n00
nothing to commit, working tree clean

./components/rtm
clean sandbox, on release-cesm2.0.04
HEAD detached at release-cesm2.0.04
nothing to commit, working tree clean

./components/ww3
clean sandbox, on ww3_181001
HEAD detached at ww3_cesm2_1_rel_01
Untracked files:
(use "git add <file>..." to include in what will be committed)
cime_config/__pycache__/
cime_config/buildnmlc

nothing added to commit but untracked files present (use "git add" to track)

 

[taoliu_tech]

Problem solved after I modified /glade/work/taoliu/code/my_cesm_code2/components/cism/source_cism/libglimmer/writestats.c file by adding #include<ctype.h>.

 

[minminfu]

Thank you Tao!

 

[erik]

This was resolved, but I'm going to move this to the porting forum. Also I want to alert @katec about this.