CCSM error while execution

[ruk15@psu_edu]

Hello,When executing the model using  PBS, I got the following error:/ccsm.exe: error while loading shared libraries: libnetcdff.so.5: cannot open shared object file: No such file or directoryMy guess is that this arises because I installed NetCDF as shared libraries. Apart from reinstalling NetCDF as static, is there a way I can solve this with shared configuration ?My 'Macros' file has this : SLIBS += -L$(LIB_NETCDF) -lnetcdffwhere $LIB_NETCDF = ~/work/local/libThanksRavi

 

[jedwards]

I suspect that you need to have LD_LIBRARY_PATH=~/work/local/lib:$LD_LIBRARY_PATH

 

[ruk15@psu_edu]

Thanks. Should I include it as an environment variable ? or in Macros file?

 

[ruk15@psu_edu]

Actually, I set LD_LIBRARY_PATH while installing NetCDF. Here it is. Do I need to do it again before executing the model ?export LD_LIBRARY_PATH=/gpfs/home/ruk15/work/local/lib:${LD_LIBRARY_PATH}export CPPFLAGS=-I/gpfs/home/ruk15/work/local/includeexport LDFLAGS=-L/gpfs/home/ruk15/work/local/lib

 

[ruk15@psu_edu]

ok, I solved that problem. As you said, it is the LD_LIBRARY_PATH which I set in my .bashrc as follows:export LD_LIBRARY_PATH=~/work/local/lib This points to the /lib sub-directory of the NetCDF directory (for me it is '~/work/local') where libnetcdff.so exists. Now I get:orterun: error while loading shared libraries: libimf.so: cannot open shared object file: No such file or directory  

 

[jedwards]

At this point you should make sure that you can run a basic mpi hello world program.