changed hgrid, now getting ORTE_ERROR_LOG

[tjive@udel_edu]

I have successfully run CAM4 using the default hgrid (1.9x2.5) but now I am trying to run it 0.9x1.25 hgrid.

I only changed the hgrid value in the configure command, but now I am wondering if I missed setting the hgrid somewhere else since I seem to be getting a segmentation fault. Below if the error from the outputfile....any help would be really appreciated!


(seq_mct_drv) : Initializing atm/ocn flux component
(seq_flux_atmocn_mct) computing only ocn albedos
(seq_mct_drv) : Calling map_lnd2atm_mct
(seq_mct_drv) : Calling map_ocn2atm_mct for mapping o2x_ox to o2x_ax
(seq_mct_drv) : Calling map_ocn2atm_mct for mapping xao_ox to xao_ax
(seq_mct_drv) : Calling map_ice2atm_mct for mapping i2x_ix to i2x_ax
(seq_mct_drv) : Calling mrg_x2a_run_mct
(seq_mct_drv) : Calling atm_init_mct
FV subcycling - n2 nsplit = 2 4
[mahoroba:15723] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 275
[mahoroba:15723] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1158
[mahoroba:15723] [0,0,0] ORTE_ERROR_LOG: Timeout in file errmgr_hnp.c at line 90
mpirun noticed that job rank 1 with PID 15727 on node mahoroba exited on signal 11 (Segmentation fault).
[mahoroba:15723] [0,0,0] ORTE_ERROR_LOG: Timeout in file base/pls_base_orted_cmds.c at line 188
[mahoroba:15723] [0,0,0] ORTE_ERROR_LOG: Timeout in file pls_rsh_module.c at line 1190
--------------------------------------------------------------------------
mpirun was unable to cleanly terminate the daemons for this job. Returned value Timeout instead of ORTE_SUCCESS.
--------------------------------------------------------------------------

 

[eaton]

The timeout error is a system problem. Those error messages are not coming from CAM.

To run CAM4 (using the standalone scripts) at 0.9x1.25 the only thing you should need to do is specify '-hgrid 0.9x1.25' in the configure command.