iferguson@berkeley_edu
New Member
Hello,
After successfully running a 1-year test case of CCSM3.0 in compset B (fully coupled mode), I am trying to run in compset H (cam,docn,dice,dlnd,cpl) at T85_gx1v3. However, I am getting errors from dice6 when trying to read the ice domain file (errors copied below).
It appears that data_in.F90 tries to read variables 'lat' and 'lon' from the ice domain file when data_in() is called by advance.F90. However, there are no variables named 'lat' or 'lon' in the domain file provided (domain.gx1v3_020308.nc), but rather there are xc(nj,ni) and yc(nj,ni). According to the ice.log.######-###### file, the domain file is set correctly. When I change 'lat'-->'xc' and 'lon'-->'yc' in data_in.F90, the same error is returned.
I am pretty new to this...Does anyone have any suggestions?
Thanks!
Ian
###########################################################################
ERRORS
**tail of dice6 log file (ice.log.######-######)
(data_in) return code 0 on acquire test.12mon.B.ifrac.0001_01-0001_12.nc /p/lscratcha/imfergus/ccsm3_MIRIN/ccsm3/inputdata_user/ice/dice6/test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) open netCDF file test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) data file = test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) netCDF global attributes:
(data_in) o title = Ice fraction forcing data
(data_in) o history = Ice fraction data from test.12mon.B for (0001-01-01:001-12-31), reformatted by IMF, 02.20.2008
(data_in) o Conventions = CF-1.0
(data_in) o source = Monthly history files from CLM, test.12mon.B
(data_in) read domain data...
(data_in) ERROR: input domain is inadaquate
(shr_sys_abort) ERROR: dice ERROR reading input ifrac file
(shr_sys_abort) WARNING: calling shr_mpi_abort() and stopping
**tail of error file ($CASE.e####)
print_memusage iam 27 End aerosol_initialize. -1 in the next line means unavailable
print_memusage: size, rss, share, text, datastack= 34064 10387 680 483 0
print_memusage: size, rss, share, text, datastack= 34064 10387 680 483 0
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
dice 400000000008C770 shr_mpi_mod_mp_sh 1480 shr_mpi_mod.F90
dice 40000000000926E0 shr_sys_mod_mp_sh 208 shr_sys_mod.F90
dice 400000000005DB10 data_in_ 131 data_in.F90
dice 4000000000004A50 advance_ 68 advance.F90
dice 400000000006B460 MAIN__ 67 main.F90
dice 40000000000048C0 Unknown Unknown Unknown
libc.so.6.1 2000000000655430 Unknown Unknown Unknown
dice 4000000000004640 Unknown Unknown Unknown
ccsm_mpmd_parser: `env OMP_NUM_THREADS=1 /p/lscratcha/imfergus/ccsm3_MIRIN//test.12mon.H/all/dice
' exited with rc 174
srun: error: thunder23: task4: Exited with exit code 1
srun: error: First task exited 60s ago
srun: task[0-3,5-38]: running
srun: task4: exited abnormally
srun: Job Failed
After successfully running a 1-year test case of CCSM3.0 in compset B (fully coupled mode), I am trying to run in compset H (cam,docn,dice,dlnd,cpl) at T85_gx1v3. However, I am getting errors from dice6 when trying to read the ice domain file (errors copied below).
It appears that data_in.F90 tries to read variables 'lat' and 'lon' from the ice domain file when data_in() is called by advance.F90. However, there are no variables named 'lat' or 'lon' in the domain file provided (domain.gx1v3_020308.nc), but rather there are xc(nj,ni) and yc(nj,ni). According to the ice.log.######-###### file, the domain file is set correctly. When I change 'lat'-->'xc' and 'lon'-->'yc' in data_in.F90, the same error is returned.
I am pretty new to this...Does anyone have any suggestions?
Thanks!
Ian
###########################################################################
ERRORS
**tail of dice6 log file (ice.log.######-######)
(data_in) return code 0 on acquire test.12mon.B.ifrac.0001_01-0001_12.nc /p/lscratcha/imfergus/ccsm3_MIRIN/ccsm3/inputdata_user/ice/dice6/test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) open netCDF file test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) data file = test.12mon.B.ifrac.0001_01-0001_12.nc
(data_in) netCDF global attributes:
(data_in) o title = Ice fraction forcing data
(data_in) o history = Ice fraction data from test.12mon.B for (0001-01-01:001-12-31), reformatted by IMF, 02.20.2008
(data_in) o Conventions = CF-1.0
(data_in) o source = Monthly history files from CLM, test.12mon.B
(data_in) read domain data...
(data_in) ERROR: input domain is inadaquate
(shr_sys_abort) ERROR: dice ERROR reading input ifrac file
(shr_sys_abort) WARNING: calling shr_mpi_abort() and stopping
**tail of error file ($CASE.e####)
print_memusage iam 27 End aerosol_initialize. -1 in the next line means unavailable
print_memusage: size, rss, share, text, datastack= 34064 10387 680 483 0
print_memusage: size, rss, share, text, datastack= 34064 10387 680 483 0
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
dice 400000000008C770 shr_mpi_mod_mp_sh 1480 shr_mpi_mod.F90
dice 40000000000926E0 shr_sys_mod_mp_sh 208 shr_sys_mod.F90
dice 400000000005DB10 data_in_ 131 data_in.F90
dice 4000000000004A50 advance_ 68 advance.F90
dice 400000000006B460 MAIN__ 67 main.F90
dice 40000000000048C0 Unknown Unknown Unknown
libc.so.6.1 2000000000655430 Unknown Unknown Unknown
dice 4000000000004640 Unknown Unknown Unknown
ccsm_mpmd_parser: `env OMP_NUM_THREADS=1 /p/lscratcha/imfergus/ccsm3_MIRIN//test.12mon.H/all/dice
' exited with rc 174
srun: error: thunder23: task4: Exited with exit code 1
srun: error: First task exited 60s ago
srun: task[0-3,5-38]: running
srun: task4: exited abnormally
srun: Job Failed