DATM stream file error: “Bad integer for item 1 in list input” at line 332 of shr_stream_mod.F90

[Jiaojiao]

What version of the code are you using?
CESM2.2.2

Have you made any changes to files in the source tree?
No source code modifications.

modified configuration files
- config_machines.xml
- config_batch.xml
- config_compilers.xml:

add 4 file in CASE directory
- user_datm.streams.txt.CLMGSWP3v1.Precip
- user_datm.streams.txt.CLMGSWP3v1.Solar
- user_datm.streams.txt.CLMGSWP3v1.TPQW
- user_nl_clm

No modification was made to Fortran files or XML schema files.

Describe every step you took leading up to the problem:
1. Make the forcing inputdata by myself
clmforc.CRUJRAv2.5_0.5x0.5.TPQWL.USCRK.2014.nc
clmforc.CRUJRAv2.5_0.5x0.5.Prec.USCRK.2014.nc
clmforc.CRUJRAv2.5_0.5x0.5.Solr.USCRK.2014.nc
domain.crujra_v2.3_0.5x0.5_USCRK_c250905.nc
surfdata_USCRK_hist_2000_16pfts_c250905.nc

2.Created a CLM-FATES single-point case:
./create_newcase \
--case CRKfates3 \
--compset I2000Clm50SpGs \
--res CLM_USRDAT \
--mach forest2 \
--run-unsupported

3. ./case.setup

4../preview_namelists


5. ./case.build --skip-provenance-check


6../case.submit --batch-args="--mem=48G --parsable"


7. check case submit


Describe your problem or question:
The case subit failed....

The case run directory is: /scratch/user/jiaodong/CIME_OUTPUT/CRKfates2/run/

Key error snippet from cesm.log:
At line 332 of file /scratch/user/jiaodong/CESM1016_2.2.2/cime/src/share/streams/shr_stream_mod.F90 (unit = 97, file = 'datm.streams.txt.CLMGSWP3v1.Solar')
Fortran runtime error: Bad integer for item 1 in list input

Error termination. Backtrace:
#0 0x15261b4de458 in read_integer
at ../../../libgfortran/io/list_read.c:1099
#1 0x15261b4e1139 in list_formatted_read_scalar
at ../../../libgfortran/io/list_read.c:2171
#2 0xb48525 in ???
#3 0xb28767 in ???
#4 0x4b7ad0 in ???
#5 0x4adb2d in ???
#6 0x427664 in ???
#7 0x417aea in ???
#8 0x40aa85 in ???
#9 0x15261a9137e4 in ???
#10 0x40ac0d in ???
#11 0xffffffffffffffff in ???
--------------------------------------------------------------------------
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun detected that one or more processes exited with non-zero status, thus causing
the job to be terminated. The first process to do so was:

Process name: [[11948,1],0]
Exit code: 2
--------------------------------------------------------------------------


I attached the three different types file zip:
1) OUTPUT_run: the case output file from /scratch/user/jiaodong/CIME_OUTPUT/$CASE/run\
2) datm: DATM file in $CASE directory
3) subset_USCRK_2000: the forcing files


Any suggestions on how to debug the Fortran input reading or validate the stream file format would be very helpful.

Best
Jiaojiao

 

[oleson]

I don't see any attached files, but since the error is pointing to your changed datm.streams.txt.CLMGSWP3v1.Solar file, I'd suggest comparing that to one that is generated by default.

 

[Jiaojiao]

Sorry Keith, my mistake, I attached the datm files this time.
And I have compared the datm.streams.txt.CLMGSWP3v1.Solar file in "/scratch/user/jiaodong/CESM1016_2.2.2/cime/scripts/CRKfates2/Buildconf/datmconf/" and in /scratch/user/jiaodong/CIME_OUTPUT/CRKfates2/run, they are same.

 

[Jiaojiao]

Just txt files can upload, sorry, i modified the format of these files!

 

[oleson]

Thanks. These should show up in your datm_in, not your datm.streams files:

<tintalgo>nearest</tintalgo>
<taxmode>cycle</taxmode>
<yearFirst>2014</yearFirst>
<yearLast>2014</yearLast>

 

[Jiaojiao]

Thank you so much for checking!! I will modify it.