apossner@carnegiescience_edu
New Member
Hi everyone,I am trying to switch from CAM4 to CAM5. I have managed to run the the E_1850_CAM5_CN compset fine at f19_g16. At the 1 deg resolution (f09_g16) I run into segmentation errors though during the initial stages of the simulation.Please find the log outptut below:...
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart_aero/emis/ar5_mam3_num_a
2_elev_1850_c090726.nc 1376256
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart_aero/emis/ar5_mam3_num_a
2_elev_1850_c090726.nc 1376256
NetCDF: Variable not found
NetCDF: Variable not found
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart/dvel/regrid_vegetation.n
c 1441792
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
cesm.exe 0000000001F7BE65 Unknown Unknown Unknown
cesm.exe 0000000001F79A87 Unknown Unknown Unknown
cesm.exe 0000000001F0EA54 Unknown Unknown Unknown
cesm.exe 0000000001F0E866 Unknown Unknown Unknown
cesm.exe 0000000001E8E7A6 Unknown Unknown Unknown
cesm.exe 0000000001E97F90 Unknown Unknown Unknown
libpthread.so.0 00000035BA40F7E0 Unknown Unknown Unknown
cesm.exe 000000000068BE3E phys_grid_mp_scat 2033 phys_grid.F90
cesm.exe 0000000000560ABF mo_drydep_mp_inte 2286 mo_drydep.F90
cesm.exe 000000000055BC99 mo_drydep_mp_dvel 1879 mo_drydep.F90
cesm.exe 00000000005293A7 mo_chemini_mp_che 215 mo_chemini.F90
cesm.exe 00000000004E9E7C chemistry_mp_chem 1010 chemistry.F90
cesm.exe 00000000006FF329 physpkg_mp_phys_i 745 physpkg.F90
cesm.exe 000000000049E49E cam_comp_mp_cam_i 181 cam_comp.F90
cesm.exe 000000000049A45D atm_comp_mct_mp_a 276 atm_comp_mct.F90
cesm.exe 00000000004333FB ccsm_comp_mod_mp_ 1058 ccsm_comp_mod.F90
cesm.exe 00000000004359E3 MAIN__ 90 ccsm_driver.F90
cesm.exe 000000000041361E Unknown Unknown Unknown
libc.so.6 00000035BA01ED1D Unknown Unknown Unknown
cesm.exe 0000000000413529 Unknown Unknown Unknown
The error occurs after opening regrid_vegetation.nc It looks to me like this may be an input/regridding problem.Thanks for any tips you may have!Anna
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart_aero/emis/ar5_mam3_num_a
2_elev_1850_c090726.nc 1376256
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart_aero/emis/ar5_mam3_num_a
2_elev_1850_c090726.nc 1376256
NetCDF: Variable not found
NetCDF: Variable not found
Opened existing file
/data/carnegie/cesm-inputdata/atm/cam/chem/trop_mozart/dvel/regrid_vegetation.n
c 1441792
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
cesm.exe 0000000001F7BE65 Unknown Unknown Unknown
cesm.exe 0000000001F79A87 Unknown Unknown Unknown
cesm.exe 0000000001F0EA54 Unknown Unknown Unknown
cesm.exe 0000000001F0E866 Unknown Unknown Unknown
cesm.exe 0000000001E8E7A6 Unknown Unknown Unknown
cesm.exe 0000000001E97F90 Unknown Unknown Unknown
libpthread.so.0 00000035BA40F7E0 Unknown Unknown Unknown
cesm.exe 000000000068BE3E phys_grid_mp_scat 2033 phys_grid.F90
cesm.exe 0000000000560ABF mo_drydep_mp_inte 2286 mo_drydep.F90
cesm.exe 000000000055BC99 mo_drydep_mp_dvel 1879 mo_drydep.F90
cesm.exe 00000000005293A7 mo_chemini_mp_che 215 mo_chemini.F90
cesm.exe 00000000004E9E7C chemistry_mp_chem 1010 chemistry.F90
cesm.exe 00000000006FF329 physpkg_mp_phys_i 745 physpkg.F90
cesm.exe 000000000049E49E cam_comp_mp_cam_i 181 cam_comp.F90
cesm.exe 000000000049A45D atm_comp_mct_mp_a 276 atm_comp_mct.F90
cesm.exe 00000000004333FB ccsm_comp_mod_mp_ 1058 ccsm_comp_mod.F90
cesm.exe 00000000004359E3 MAIN__ 90 ccsm_driver.F90
cesm.exe 000000000041361E Unknown Unknown Unknown
libc.so.6 00000035BA01ED1D Unknown Unknown Unknown
cesm.exe 0000000000413529 Unknown Unknown Unknown
The error occurs after opening regrid_vegetation.nc It looks to me like this may be an input/regridding problem.Thanks for any tips you may have!Anna