Error in building cesm1_0_5

[xlong@ncsu_edu]

I think the error was from netcdf lib,  as is shown in the ccsm.bldlog.1 file Then I add one line in the Macros file as:LDFLAGS       := -L$(NETCDF_PATH)/lib -lnetcdff -lnetcdfThen new error come out, as is in ccsm.bldlog.2 fileany help is appreciated.thanks

 

[jedwards]

You need to link to the hdf5 library - you can usually get the link line you need by running nc-config --libsFor example on my laptop I get: nc-config --libs -L/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lm -lz -lcurl

 

[jedwards]

You need to link to the hdf5 library - you can usually get the link line you need by running nc-config --libsFor example on my laptop I get: nc-config --libs -L/usr/local/lib -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lm -lz -lcurl

 

[xlong@ncsu_edu]

Thanks.Problem fixed.I added a line in the Macros as:

LDFLAGS       := -L$(NETCDF_PATH)/lib -lnetcdff -lnetcdfLDFLAGS       += -L/usr/local/apps/hdf-centos7/hdf5.18.4-intel2013/lib  -lhdf5_hl -lhdf5Now I can successfully build the model.However, when I compile the model in a f09_g16 resolution with F2000, the model freeze at the 'Initialize atm component' step.Then I try to reconfigure the model in a f45_g37 res, the model abort at 'Initialize atm component' step with a error as 'forrtl: severe (174): SIGSEGV, segmentation fault occurred' Thanks 

 

[xlong@ncsu_edu]

Thanks.Problem fixed.I added a line in the Macros as:

LDFLAGS       := -L$(NETCDF_PATH)/lib -lnetcdff -lnetcdfLDFLAGS       += -L/usr/local/apps/hdf-centos7/hdf5.18.4-intel2013/lib  -lhdf5_hl -lhdf5Now I can successfully build the model.However, when I compile the model in a f09_g16 resolution with F2000, the model freeze at the 'Initialize atm component' step.Then I try to reconfigure the model in a f45_g37 res, the model abort at 'Initialize atm component' step with a error as 'forrtl: severe (174): SIGSEGV, segmentation fault occurred' Thanks 

 

[xlong@ncsu_edu]

the intel compile version is : ifort version 14.0.2 and icc version 14.0.2 (gcc version 4.8.0 compatibility) if this is useful

 

[xlong@ncsu_edu]

the intel compile version is : ifort version 14.0.2 and icc version 14.0.2 (gcc version 4.8.0 compatibility) if this is useful

 

[jedwards]

I can't see the problem in what you've sent me.   You might try to compile in debug mode.

 

[jedwards]

I can't see the problem in what you've sent me.   You might try to compile in debug mode.

 

[xlong@ncsu_edu]

Fixed.It is the Intel 1.4.x issue.I reduced the optimization level to -O1, problem solvedThanks.

 

[xlong@ncsu_edu]

Fixed.It is the Intel 1.4.x issue.I reduced the optimization level to -O1, problem solvedThanks.