Error in create_newcase

[Chiyang]

./create_newcase --compset F1850 --res f09_f09_mg17 --case test --machine ibmintel
Running the code produces the following error:
Compset longname is 1850_CAM60_CLM50%SP_CICE%PRES_DOCN%DOM_MOSART_CISM2%NOEVOLVE_SWAV
Compset specification file is /home2/liy/my_cesm_sandbox/cime/../components/cam//cime_config/config_compsets.xml
Compset forcing is 1850
ATM component is CAM cam6 physics:
LND component is clm5.0:Satellite phenology:
ICE component is Sea ICE (cice) model version 5 :prescribed cice
OCN component is DOCN prescribed ocean mode
ROF component is MOSART: MOdel for Scale Adaptive River Transport
GLC component is cism2 (default, higher-order, can run in parallel):cism ice evolution turned off (this is the standard configuration unless you're explicitly interested in ice evolution):
WAV component is Stub wave component
ESP component is
Pes specification file is /home2/liy/my_cesm_sandbox/cime/../components/cam//cime_config/config_pes.xml
Compset specific settings: name is SSTICE_DATA_FILENAME and value is $DIN_LOC_ROOT/atm/cam/sst/sst_HadOIBl_bc_0.9x1.25_clim_pi_c101028.nc
Compset specific settings: name is SSTICE_GRID_FILENAME and value is $DIN_LOC_ROOT/share/domains/domain.ocn.fv0.9x1.25_gx1v7.151020.nc
Traceback (most recent call last):
File "/home2/liy/my_cesm_sandbox/cime/scripts/./create_newcase", line 218, in <module>
_main_func(__doc__)
File "/home2/liy/my_cesm_sandbox/cime/scripts/./create_newcase", line 206, in _main_func
case.create(casename, srcroot, compset, grid, user_mods_dir=user_mods_dir,
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/case/case.py", line 1440, in create
self.configure(compset_name, grid_name, machine_name=machine_name,
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/case/case.py", line 813, in configure
machobj = Machines(machine=machine_name)
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/XML/machines.py", line 36, in __init__
GenericXML.__init__(self, infile, schema)
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/XML/generic_xml.py", line 57, in __init__
self.read(infile, schema)
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/XML/generic_xml.py", line 87, in read
self.read_fd(fd)
File "/home2/liy/my_cesm_sandbox/cime/scripts/Tools/../../scripts/lib/CIME/XML/generic_xml.py", line 112, in read_fd
self.tree = ET.parse(fd)
File "/home2/liy/miniconda3/lib/python3.9/xml/etree/ElementTree.py", line 1222, in parse
tree.parse(source, parser)
File "/home2/liy/miniconda3/lib/python3.9/xml/etree/ElementTree.py", line 580, in parse
self._root = parser._parse_whole(source)
xml.etree.ElementTree.ParseError: junk after document element: line 88, column 2
I have checked the xml file and there are no syntax errors.

 

[xnnzka]

Hi, I think there might be errors in your xml file, such as missing end tag (">").
If your question still exists, you can upload your xml files to let me and others to help you.