rosh_me91@gmail_com
Member
Hi ,
Im trying to create my own CLM4.5 surface dataset for 0.9x1.25 resolution by runningon CESM1.2.1 on HPC server./mksurfdata.pl -res 0.9x1.25 -crop -years 2000 . Is there something wrong that Im doing or should by running only this command will give me a 1 degree resolution dataset?? Also, the datasets it asked were provided and finally I was getting the following error by running this command:
CSMDATA is /scratch/cas/phd/asz122525/inputdata
resolution: 0.9x1.25 rcp=-999.9 sim_year = 2000
namelist: namelist
&clmexp
nglcec = 0
mksrf_fgrid = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fpft = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fglacier = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_GLOBE-Gardner_to_0.9x1.25_nomask_aave_da_c120923.nc'
map_fsoicol = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_furban = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_LandScan2004_to_0.9x1.25_nomask_aave_da_c120522.nc'
map_fmax = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_USGS_to_0.9x1.25_nomask_aave_da_c120926.nc'
map_forganic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_5x5min_ISRIC-WISE_to_0.9x1.25_nomask_aave_da_c120525.nc'
map_flai = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fharvest = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_flakwat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_MODIS_to_0.9x1.25_nomask_aave_da_c120523.nc'
map_fwetlnd = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fvocef = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fsoitex = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_5minx5min_soitex_to_0.9x1.25_aave_da_110722.nc'
map_furbtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_10minx10min_topo_to_0.9x1.25_aave_da_110630.nc'
map_flndtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_10minx10min_topo_to_0.9x1.25_aave_da_110630.nc'
map_fgdp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fpeat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fabm = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_ftopostats = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_1km-merge-10min_HYDRO1K-merge-nomask_to_0.9x1.25_nomask_aave_da_c130405.nc'
map_fvic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.9x1.25_GRDC_to_0.9x1.25_nomask_aave_da_c130308.nc'
map_fch4 = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_360x720_cruncep_to_0.9x1.25_nomask_aave_da_c130326.nc'
mksrf_fsoitex = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_soitex.10level.c010119.nc'
mksrf_forganic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_organic_10level_5x5min_ISRIC-WISE-NCSCD_nlev7_c120830.nc'
mksrf_flakwat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_LakePnDepth_3x3min_simyr2004_c111116.nc'
mksrf_fwetlnd = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_lanwat.050425.nc'
mksrf_fmax = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_fmax_3x3min_USGS_c120911.nc'
mksrf_fglacier = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_glacier_3x3min_simyr2000.c120926.nc'
mksrf_fvocef = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_vocef_0.5x0.5_simyr2000.c110531.nc'
mksrf_furbtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_topo.10min.c080912.nc'
mksrf_flndtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/topodata_10min_USGS_071205.nc'
mksrf_fgdp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_gdp_0.5x0.5_AVHRR_simyr2000.c130228.nc'
mksrf_fpeat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_peatf_0.5x0.5_AVHRR_simyr2000.c130228.nc'
mksrf_fabm = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_abm_0.5x0.5_AVHRR_simyr2000.c130201.nc'
mksrf_ftopostats = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_topostats_1km-merge-10min_HYDRO1K-merge-nomask_simyr2000.c130402.nc'
mksrf_fvic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_vic_0.9x1.25_GRDC_simyr2000.c130307.nc'
mksrf_fch4 = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_ch4inversion_360x720_cruncep_simyr2000.c130322.nc'
outnc_double = .true.
all_urban = .false.
no_inlandwet = .true.
mksrf_furban = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_urban_0.05x0.05_simyr2000.c120621.nc'
mksrf_fvegtyp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_24pftirrNT_landuse_rc2000_c120712.nc'
mksrf_fsoicol = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_soilcol_global_c090324.nc'
mksrf_flai = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_lai24pftnontrop_c120712.nc'
fsurdat = 'surfdata_0.9x1.25_simyr2000_c160505.nc'
fsurlog = 'surfdata_0.9x1.25_simyr2000_c160505.log'
mksrf_fdynuse = ' '
fdyndat = ' '
numpft = 24
/
./mksurfdata_map < namelist
Attempting to initialize control settings .....
Attempting to create surface boundary data .....
------------------------------------------------------------
mksrf_fgrid =
/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc
mksrf_gridtype = global
Output ALL data in file as 64-bit
Set wetland to 0% over land
netcdf error from mkurbanInit rcode = -46 error =
NetCDF: Invalid dimension ID or name
sh: line 1: 9509 Aborted (core dumped) ./mksurfdata_map < namelist
ERROR in mksurfdata_map: 34304
Can anyone please help me to rectify this error. Thank in advance
Roshni MathurCentre for Atmospheric SciencesIIT-Delhi
Im trying to create my own CLM4.5 surface dataset for 0.9x1.25 resolution by runningon CESM1.2.1 on HPC server./mksurfdata.pl -res 0.9x1.25 -crop -years 2000 . Is there something wrong that Im doing or should by running only this command will give me a 1 degree resolution dataset?? Also, the datasets it asked were provided and finally I was getting the following error by running this command:
CSMDATA is /scratch/cas/phd/asz122525/inputdata
resolution: 0.9x1.25 rcp=-999.9 sim_year = 2000
namelist: namelist
&clmexp
nglcec = 0
mksrf_fgrid = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fpft = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fglacier = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_GLOBE-Gardner_to_0.9x1.25_nomask_aave_da_c120923.nc'
map_fsoicol = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_furban = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_LandScan2004_to_0.9x1.25_nomask_aave_da_c120522.nc'
map_fmax = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_USGS_to_0.9x1.25_nomask_aave_da_c120926.nc'
map_forganic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_5x5min_ISRIC-WISE_to_0.9x1.25_nomask_aave_da_c120525.nc'
map_flai = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_fharvest = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc'
map_flakwat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_3x3min_MODIS_to_0.9x1.25_nomask_aave_da_c120523.nc'
map_fwetlnd = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fvocef = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fsoitex = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_5minx5min_soitex_to_0.9x1.25_aave_da_110722.nc'
map_furbtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_10minx10min_topo_to_0.9x1.25_aave_da_110630.nc'
map_flndtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_10minx10min_topo_to_0.9x1.25_aave_da_110630.nc'
map_fgdp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fpeat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_fabm = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_lanwat_to_0.9x1.25_aave_da_110307.nc'
map_ftopostats = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_1km-merge-10min_HYDRO1K-merge-nomask_to_0.9x1.25_nomask_aave_da_c130405.nc'
map_fvic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.9x1.25_GRDC_to_0.9x1.25_nomask_aave_da_c130308.nc'
map_fch4 = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_360x720_cruncep_to_0.9x1.25_nomask_aave_da_c130326.nc'
mksrf_fsoitex = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_soitex.10level.c010119.nc'
mksrf_forganic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_organic_10level_5x5min_ISRIC-WISE-NCSCD_nlev7_c120830.nc'
mksrf_flakwat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_LakePnDepth_3x3min_simyr2004_c111116.nc'
mksrf_fwetlnd = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_lanwat.050425.nc'
mksrf_fmax = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_fmax_3x3min_USGS_c120911.nc'
mksrf_fglacier = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_glacier_3x3min_simyr2000.c120926.nc'
mksrf_fvocef = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_vocef_0.5x0.5_simyr2000.c110531.nc'
mksrf_furbtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_topo.10min.c080912.nc'
mksrf_flndtopo = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/topodata_10min_USGS_071205.nc'
mksrf_fgdp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_gdp_0.5x0.5_AVHRR_simyr2000.c130228.nc'
mksrf_fpeat = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_peatf_0.5x0.5_AVHRR_simyr2000.c130228.nc'
mksrf_fabm = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_abm_0.5x0.5_AVHRR_simyr2000.c130201.nc'
mksrf_ftopostats = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_topostats_1km-merge-10min_HYDRO1K-merge-nomask_simyr2000.c130402.nc'
mksrf_fvic = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_vic_0.9x1.25_GRDC_simyr2000.c130307.nc'
mksrf_fch4 = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_ch4inversion_360x720_cruncep_simyr2000.c130322.nc'
outnc_double = .true.
all_urban = .false.
no_inlandwet = .true.
mksrf_furban = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/mksrf_urban_0.05x0.05_simyr2000.c120621.nc'
mksrf_fvegtyp = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_24pftirrNT_landuse_rc2000_c120712.nc'
mksrf_fsoicol = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_soilcol_global_c090324.nc'
mksrf_flai = '/scratch/cas/phd/asz122525/inputdata/lnd/clm2/rawdata/pftlandusedyn.0.5x0.5.simyr1850-2005.c090630/mksrf_lai24pftnontrop_c120712.nc'
fsurdat = 'surfdata_0.9x1.25_simyr2000_c160505.nc'
fsurlog = 'surfdata_0.9x1.25_simyr2000_c160505.log'
mksrf_fdynuse = ' '
fdyndat = ' '
numpft = 24
/
./mksurfdata_map < namelist
Attempting to initialize control settings .....
Attempting to create surface boundary data .....
------------------------------------------------------------
mksrf_fgrid =
/scratch/cas/phd/asz122525/inputdata/lnd/clm2/mappingdata/maps/0.9x1.25/map_0.5x0.5_landuse_to_0.9x1.25_aave_da_110307.nc
mksrf_gridtype = global
Output ALL data in file as 64-bit
Set wetland to 0% over land
netcdf error from mkurbanInit rcode = -46 error =
NetCDF: Invalid dimension ID or name
sh: line 1: 9509 Aborted (core dumped) ./mksurfdata_map < namelist
ERROR in mksurfdata_map: 34304
Can anyone please help me to rectify this error. Thank in advance
Roshni MathurCentre for Atmospheric SciencesIIT-Delhi