Dear all,
I have a problem when running clm5.0.35.
I did a regional simulation by cutting domain and surfdata file.
cd /data/lixiao/clm5.0.35/tools/ncl_scripts
vim sample_inlist
fatmlndfrc = '/data/lixiao/cesm/inputdata/share/domains/domain.lnd.fv0.23x0.31_gx1v6.100517.nc'
fsurdat = '/data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex/surfdata_0.23x0.31_simyr1850_c100404.nc'
vim sample_outlist
fatmlndfrc = 'domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc'
fsurdat = 'surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc'
./getregional_datasets.pl -ne 38,125 -sw 22,88 -i sample_inlist -o sample_outlist
cp domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc /data/lixiao/cesm/inputdata/share/domains
cp surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc /data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex
cd /data/lixiao/clm5.0.35/cime/scripts/
./create_newcase --case CLM50Sp_GSWP --res f02_g17 --compset 1850_DATM%GSWP3v1_CLM50%SP_SICE_SOCN_MOSART_SGLC_SWAV --compiler intel --mach myintel --run-unsupported
cd /data/lixiao/clm5.0.35/cime/scripts/CLM50Sp_GSWP
./xmlchange DATM_CLMNCEP_YR_START=2013
./xmlchange DATM_CLMNCEP_YR_END=2014
./xmlchange RUN_STARTDATE=2013-01-01
./xmlchange STOP_OPTION=nmonths
./xmlchange STOP_N=24
./xmlchange REST_OPTION=nyears
./xmlchange REST_N=1
./xmlchange RUN_TYPE=startup
./xmlchange CONTINUE_RUN=TRUE
./xmlchange LND_DOMAIN_FILE=domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc
./xmlchange ATM_DOMAIN_FILE=domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc
./case.setup
./preview_run
vim user_nl_clm
fsurdat = "/data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex/surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc"
hist_empty_htapes = .true.
hist_mfilt = 12
hist_nhtfrq = 0
hist_fincl1 = 'QH2OSFC:A', 'QH2OSFC:X', 'QH2OSFC:M'
hist_fincl2 = 'TWS:A', 'TWS:X', 'TWS:M'
hist_fincl3 = 'QFLOOD:A', 'QFLOOD:X', 'QFLOOD:M'
hist_fincl4 = 'QOVER:A', 'QOVER:X', 'QOVER:M'
./preview_namelists
./check_input_data
./case.build --skip-provenance-check
./case.submit
But I met an run fail:
2022-09-18 11:22:11 MODEL EXECUTION BEGINS HERE
run command is mpirun -np 96 /data/lixiao/cesm/scratch/CLM50Sp_GSWP/bld/cesm.exe >> cesm.log.$LID 2>&1
ERROR: RUN FAIL: Command 'mpirun -np 96 /data/lixiao/cesm/scratch/CLM50Sp_GSWP/bld/cesm.exe >> cesm.log.$LID 2>&1 ' failed
See log file for details: /data/lixiao/cesm/scratch/CLM50Sp_GSWP/run/cesm.log.220918-112211
The log file and xml files are attached and I'm looking forward to your reply!
I have a problem when running clm5.0.35.
I did a regional simulation by cutting domain and surfdata file.
cd /data/lixiao/clm5.0.35/tools/ncl_scripts
vim sample_inlist
fatmlndfrc = '/data/lixiao/cesm/inputdata/share/domains/domain.lnd.fv0.23x0.31_gx1v6.100517.nc'
fsurdat = '/data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex/surfdata_0.23x0.31_simyr1850_c100404.nc'
vim sample_outlist
fatmlndfrc = 'domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc'
fsurdat = 'surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc'
./getregional_datasets.pl -ne 38,125 -sw 22,88 -i sample_inlist -o sample_outlist
cp domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc /data/lixiao/cesm/inputdata/share/domains
cp surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc /data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex
cd /data/lixiao/clm5.0.35/cime/scripts/
./create_newcase --case CLM50Sp_GSWP --res f02_g17 --compset 1850_DATM%GSWP3v1_CLM50%SP_SICE_SOCN_MOSART_SGLC_SWAV --compiler intel --mach myintel --run-unsupported
cd /data/lixiao/clm5.0.35/cime/scripts/CLM50Sp_GSWP
./xmlchange DATM_CLMNCEP_YR_START=2013
./xmlchange DATM_CLMNCEP_YR_END=2014
./xmlchange RUN_STARTDATE=2013-01-01
./xmlchange STOP_OPTION=nmonths
./xmlchange STOP_N=24
./xmlchange REST_OPTION=nyears
./xmlchange REST_N=1
./xmlchange RUN_TYPE=startup
./xmlchange CONTINUE_RUN=TRUE
./xmlchange LND_DOMAIN_FILE=domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc
./xmlchange ATM_DOMAIN_FILE=domain.lnd.fv0.23x0.31_gx1v6.100517_Yangtze.nc
./case.setup
./preview_run
vim user_nl_clm
fsurdat = "/data/lixiao/cesm/inputdata/lnd/clm2/surfdata_map/lixiao_ex/surfdata_0.23x0.31_simyr1850_c100404_Yangtze.nc"
hist_empty_htapes = .true.
hist_mfilt = 12
hist_nhtfrq = 0
hist_fincl1 = 'QH2OSFC:A', 'QH2OSFC:X', 'QH2OSFC:M'
hist_fincl2 = 'TWS:A', 'TWS:X', 'TWS:M'
hist_fincl3 = 'QFLOOD:A', 'QFLOOD:X', 'QFLOOD:M'
hist_fincl4 = 'QOVER:A', 'QOVER:X', 'QOVER:M'
./preview_namelists
./check_input_data
./case.build --skip-provenance-check
./case.submit
But I met an run fail:
2022-09-18 11:22:11 MODEL EXECUTION BEGINS HERE
run command is mpirun -np 96 /data/lixiao/cesm/scratch/CLM50Sp_GSWP/bld/cesm.exe >> cesm.log.$LID 2>&1
ERROR: RUN FAIL: Command 'mpirun -np 96 /data/lixiao/cesm/scratch/CLM50Sp_GSWP/bld/cesm.exe >> cesm.log.$LID 2>&1 ' failed
See log file for details: /data/lixiao/cesm/scratch/CLM50Sp_GSWP/run/cesm.log.220918-112211
The log file and xml files are attached and I'm looking forward to your reply!