Scheduled Downtime
On Tuesday 24 October 2023 @ 5pm MT the forums will be in read only mode in preparation for the downtime. On Wednesday 25 October 2023 @ 5am MT, this website will be down for maintenance and expected to return online later in the morning.
Normal Operations
The forums are back online with normal operations. If you notice any issues or errors related to the forums, please reach out to help@ucar.edu

Error when running CESM postprocessing on Cheyenne

apauling

Andrew Pauling
New Member
I am trying to run the CESM postprocessing tool to create single variable timeseries files from a fully-coupled, 1 degree CESM2 run of 100 years. The script starts running fine but after some time of generating the atmosphere files it hangs and the within the timeseries log files there are multiple instances of "NetCDF: HDF Error". I have tried enabling debugging but there is no further information about what is causing the error. Any help would be much appreciated.
 

dbailey

CSEG and Liaisons
Staff member
Hi Andrew,

This package is not officially supported anymore. A couple things to try:

  1. Increase the number of processors in the timeseries script.
  2. Try generating each component one at a time.
  • set TIMESERIES_GENERATE_ALL in env_postprocess.xml to FALSE.
  • manually set tseries_create to TRUE for one component at a time
  1. As a last resort, delete the postprocess directory and recreate it. Also delete all of the existing post-processed files. Sometimes things get hung up and starting fresh can help.
Dave
 

apauling

Andrew Pauling
New Member
Hi Dave,

Thank you for the responses here and on Github. I finally found that the reason it was failing was because I had exceeded the disk quota. The errors just didn't indicate that it any way. All working now.

Andrew
 
Top