Error when spinup BGC

[1751807240@qq_com]

Hi all  I am doing a spinup  with BGC compset by the steps of user's guide. After i submit, the simulation works fine. At the end of the simulation, it says it is successful. but some error come out.  May i get some advice or help?please! Thanks a lot!The following is scripts which I used for my site: 
./create_newcase -case bgcspinupr1 -res CLM_USRDAT -compset ICLM45BGCCROP -mach sabercd bgcspinup1./xmlchange CLM_FORCE_COLDSTART=on,RUN_TYPE=startup./xmlchange DATM_MODE=CLM1PT./xmlchange CLM_CONFIG_OPTS="-crop on" -append./xmlchange CLM_BLDNML_OPTS="-irrig .true." -appendecho 'hist_nhtfrq = -8760' >> user_nl_clmecho ' hist_dov2xy = .false. ' >> user_nl_clm./cesm_setup./bgcspinup.build ./bgcspinup.submit    Error is shown above: (seq_mct_drv): ===============       SUCCESSFUL TERMINATION OF CPL7-CCSM ===============Archiving cesm output to /home/zyz/cesm/CESM1_2_2/archive/bgcspinupr1Calling the short-term archiving script st_archive.sh st_archive.sh: start of short-term archivingst_archive.sh: restart files from end of run will be saved,                interim restart files will be deletedst_archive.sh: short-term archiving completed successfullyRESUBMIT is now 0------------------------------------------------------------------------- CESM BUILDNML SCRIPT STARTING - To prestage restarts, untar a restart.tar file into /home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run infile is /home/zyz/cesm/scripts/bgcspinupr1/Buildconf/cplconf/cesm_namelist CLM configure done.CLM adding use_case 2000_control defaults for var sim_year with val 2000 CLM adding use_case 2000_control defaults for var sim_year_range with val constant CLM adding use_case 2000_control defaults for var stream_year_first_ndep with val 2000 CLM adding use_case 2000_control defaults for var stream_year_first_popdens with val 1850 CLM adding use_case 2000_control defaults for var stream_year_last_ndep with val 2000 CLM adding use_case 2000_control defaults for var stream_year_last_popdens with val 1850 CLM adding use_case 2000_control defaults for var use_case_desc with val Conditions to simulate 2000 land-use  CESM BUILDNML SCRIPT HAS FINISHED SUCCESSFULLY-------------------------------------------------------------------------------------------------------------------------------------------------- CESM PRESTAGE SCRIPT STARTING - Case input data directory, DIN_LOC_ROOT, is /home/zyz/cesm/mycsmdata/ - Checking the existence of input datasets in DIN_LOC_ROOT CESM PRESTAGE SCRIPT HAS FINISHED SUCCESSFULLY-------------------------------------------------------------------------Thu May 31 00:20:57 CST 2018 -- CSM EXECUTION BEGINS HEREThu May 31 00:21:22 CST 2018 -- CSM EXECUTION HAS FINISHEDModel did not complete - see /home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/cesm.log.180531-002029ccsm_postrun error: problem sourcing tempres /home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-233938: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-225901: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-221813: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-213724: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-205639: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-201602: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-193457: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-185409: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-181326: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-173247: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-165206: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-161132: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-153048: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-145012: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-140949: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-132913: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-124844: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-120811: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-112747: No such file or directoryrm: cannot remove ‘tempres’: No such file or directory/home/zyz/cesm/CESM1_2_2/case/bgcspinupr1/run/timing/ccsm_timing_stats not found, exitgzip: timing/ccsm_timing_stats.180530-104715: No such file or directory  zhu

 

[mmills]

This part of the forum is for the WACCM model, so those with expertise in BGC will likely not see your question. You should post your question in the Biogeochemistry Modeling section of this forum:https://bb.cgd.ucar.edu/forums/software-and-run-time-issues-5