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Error while running CESM2

L

luka0418

Fan Wang
New Member
Dear all,

I got an unknown error when I submitted the jobs. Here is the detailed information in cesm.log.xxx.

Opened existing file
/Users/mgao2/wangfan/cesm/inputdata_new/cesm2_init/b.e21.BWHIST.f09_g17.CMIP6-h
istorical-WACCM.001/1950-01-01/b.e21.BWHIST.f09_g17.CMIP6-historical-WACCM.001.
cam.i.1950-01-01-00000.nc 65536
Opened existing file
/Users/mgao2/wangfan/cesm/inputdata_new/atm/cam/topo/fv_0.9x1.25_nc3000_Nsw042_
Nrs008_Co060_Fi001_ZR_sgh30_24km_GRNL_c170103.nc 131072
Opened existing file
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc 196608
ERROR: Unknown error submitted to shr_abort_abort.
flbc_inti: time out of bounds for dataset =
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc
ERROR: Unknown error submitted to shr_abort_abort.
flbc_inti: time out of bounds for dataset =
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc

=========================================================================

And this is the error in atm.log.XXXX
flbc_inti: diagnostics

lower bndy timing specs
type = SERIAL
fixed date = 0
fixed time = 0

there are 24 species with specified lower bndy values

(GETFIL): attempting to find local file
LBC_17500116-20150116_CMIP6_0p5degLat_c180905.nc
(GETFIL): using
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc
flbc_inti: time out of bounds for dataset =
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc
ERROR: Unknown error submitted to shr_abort_abort.

If anyone knows the reason, hope you can help me.

Thanks a lot,

Fan
 
K

katec

CSEG and Liaisons
Staff member
Hi Fan, I'm going to move this to the WACCM board because you are having trouble with a WACCM input dataset. But first, I see the error:
time out of bounds for dataset =
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc

Please check the model date and the dates available on the file above. This error means that the dates you are trying to run are not included in the data on the file here.
 
L

luka0418

Fan Wang
New Member
katec said:
Hi Fan, I'm going to move this to the WACCM board because you are having trouble with a WACCM input dataset. But first, I see the error:
time out of bounds for dataset =
/Users/mgao2/wangfan/cesm/inputdata_new/atm/waccm/lb/LBC_17500116-20150116_CMIP
6_0p5degLat_c180905.nc

Please check the model date and the dates available on the file above. This error means that the dates you are trying to run are not included in the data on the file here.
Click to expand...
Thanks for your reply. It is true that the dates I was trying to run were not included in the data on the file. As a novice to CESM, I'm confused if I want to run the date from 2020 to 2030, which compsets should t choose.
 
mmills

mmills

CSEG and Liaisons
Staff member
luka0418 said:
Thanks for your reply. It is true that the dates I was trying to run were not included in the data on the file. As a novice to CESM, I'm confused if I want to run the date from 2020 to 2030, which compsets should t choose.
Click to expand...
For runs between years 2015 and 2100, you need to chose a future scenario compset. Future scenarios for CMIP6 ScenarioMIP are known as "shared socioeconomic pathways", or SSPs. These represent different futures ranging from aggressive emission reductions, including significant negative emissions (SSP1-2.6) to business as usual (SSP5-8.5).

WACCM SSP compsets begin with the letters BWSSP. See details in the slides from the CESM tutorial:

 
L

luka0418

Fan Wang
New Member
mmills said:
For runs between years 2015 and 2100, you need to chose a future scenario compset. Future scenarios for CMIP6 ScenarioMIP are known as "shared socioeconomic pathways", or SSPs. These represent different futures ranging from aggressive emission reductions, including significant negative emissions (SSP1-2.6) to business as usual (SSP5-8.5).

WACCM SSP compsets begin with the letters BWSSP. See details in the slides from the CESM tutorial:

Click to expand...
Hi Mills,

Thanks for your reply.

According to your guidance, I tried to choose a future scenario compset. I could not find future scenario compsets in CESM2.2, so I used CESM2.1.2. However, when I tried to build the model, I met the following problem although I could successfully build a model when using version 2.2. I also tried version 2.1.3 and got the same problem.

ERROR: BUILD FAIL: buildexe failed, cat /Users/mgao2/wangfan/cesm2.1.2/cime_out/ssp1_nve/bld/cesm.bldlog.220203-044543

Here are the first several lines in the log file.

Building a single executable version of target coupled model
ERROR: Command make exec_se -j 4 EXEC_SE=/Users/mgao2/wangfan/cesm2.1.2/cime_out/ssp1_nve/bld/cesm.exe MODEL=driver LIBROOT=/Users/mgao2/wangfan/cesm2.1.2/cime_out/ssp1_nve/bld/lib -f /Dedicated/CGRER-Data/mgao2/WangFan/cesm2.1.2/my_cesm_sandbox/cime/scripts/ssp1_nve/Tools/Makefile failed rc=2
out=cat: Srcfiles: No such file or directory
/Dedicated/CGRER-Data/mgao2/WangFan/cesm2.1.2/my_cesm_sandbox/cime/scripts/ssp1_nve/Tools/mkSrcfiles
cp -f Filepath Deppath
 
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