xiyanxu@gmail_com
New Member
I am making regional run with I1850CRUCLM45BGC composet with CESM1.2.2. When the run is initialized with file created by interpinic, the history file is created but immediately terminated by the errors below.
These errors also occur in CESM1.2.1. The levgrnd, levlak,levdcmp,lon,lat,are, topo are shown in the history file,but the values are zero. I can see from the lnd.log.XXXX file that retart file was successfully read and history file was successfully difined. But after that when writing history file, errors occurs. If I don't use the interpiniced initial file, there's no error. Is there anyone can help? Thank you so much!!
cesm.log.XXXXXXX
....
WARNING: water balance error nstep = 0 indexc= 1761
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 1766 3
1.682133945529015E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1167 3
1.912658951651470E-003
WARNING: water balance error nstep = 0 indexc= 507
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 1430 2
2.256971696195905E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1220 3
1.131143484683002E-003
Negative conc. in ch4tran. c,j,deficit (mol): 239 2
Negative conc. in ch4tran. c,j,deficit (mol): 301 2
3.436985812089745E-003
1.175111523888160E-003
WARNING: snow balance error nstep = 0 indexc= 384 ltype:
2 errh2osno= -1.077903423870805E-005
Negative conc. in ch4tran. c,j,deficit (mol): 60 2
2.319489647517354E-003
Negative conc. in ch4tran. c,j,deficit (mol): 60 3
1.439129437016264E-003
Negative conc. in ch4tran. c,j,deficit (mol): 328 2
1.833615839044659E-003
Negative conc. in ch4tran. c,j,deficit (mol): 328 3
1.291774594302628E-003
Negative conc. in ch4tran. c,j,deficit (mol): 383 2
3.884753156414401E-003
WARNING: water balance error nstep = 0 indexc= 550
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 342 2
Negative conc. in ch4tran. c,j,deficit (mol): 225 2
WARNING: water balance error nstep = 0 indexc= 521
1.831328459039113E-003
3.198380591750389E-003
Negative conc. in ch4tran. c,j,deficit (mol): 342 3
errh2o= -2.89526396244037
1.289461561423224E-003
Negative conc. in ch4tran. c,j,deficit (mol): 46 2
Negative conc. in ch4tran. c,j,deficit (mol): 356 2
2.210984140670391E-003
1.245439934396015E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1481 2
Negative conc. in ch4tran. c,j,deficit (mol): 1612 2
1.030888764698566E-003
1.401280647346900E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1553 2
2.249444222910866E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1494 2
1.486158061789606E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1359 3
1.394561011021509E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1443 2
Negative conc. in ch4tran. c,j,deficit (mol): 1371 3
Negative conc. in ch4tran. c,j,deficit (mol): 1569 2
3.233172429260094E-003
1.399118763440107E-003
2.444262816408948E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1534 2
1.518425181068753E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1596 2
1.290672076213265E-003
Negative conc. in ch4tran. c,j,deficit (mol): 315 2
WARNING: water balance error nstep = 0 indexc= 194
1.293660990587647E-003
errh2o= -2.89526396244037
WARNING: snow balance error nstep = 0 indexc= 398 ltype:
2 errh2osno= -1.275479905027584E-005
Negative conc. in ch4tran. c,j,deficit (mol): 411 2
1.164683756181237E-003
Negative conc. in ch4tran. c,j,deficit (mol): 32 2
Negative conc. in ch4tran. c,j,deficit (mol): 211 2
Negative conc. in ch4tran. c,j,deficit (mol): 89 2
1.781484200262244E-003
1.245713043795234E-003
1.572831105360022E-003
WARNING: water balance error nstep = 0 indexc= 596
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 74 2
1.573129284062894E-003
Negative conc. in ch4tran. c,j,deficit (mol): 370 2
Negative conc. in ch4tran. c,j,deficit (mol): 253 1
1.390435996798079E-003
1.078570420300920E-003
Negative conc. in ch4tran. c,j,deficit (mol): 253 2
4.410079368585279E-003
Negative conc. in ch4tran. c,j,deficit (mol): 285 2
Negative conc. in ch4tran. c,j,deficit (mol): 103 2
1.534708914969129E-003
1.710046916626776E-003
Negative conc. in ch4tran. c,j,deficit (mol): 180 2
1.931760110182332E-003
Negative conc. in ch4tran. c,j,deficit (mol): 180 3
Negative conc. in ch4tran. c,j,deficit (mol): 397 1
1.412713945968214E-003
1.248736827103428E-003
Negative conc. in ch4tran. c,j,deficit (mol): 397 2
4.422121276022629E-003
WARNING: water balance error nstep = 0 indexc= 282
errh2o= -2.89526396244037
WARNING: water balance error nstep = 0 indexc= 27
errh2o= -2.89526396244037
WARNING: water balance error nstep = 0 indexc= 210
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 269 2
1.458577932343643E-003
Negative conc. in ch4tran. c,j,deficit (mol): 195 2
1.397832000215802E-003
Setting mpi info: striping_factor=16
Setting mpi info: striping_unit=1048576
Negative conc. in ch4tran. c,j,deficit (mol): 1180 3
1.791996740438412E-003
Opened file ./alaska_e21.clm2.h0.1950-01-01-00000.nc to write 262144
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
Rank 1 [Fri Aug 1 00:38:46 2014] [c7-0c2s2n2] application called MPI_Abort(MPI_COMM_WORLD, 1) - process 1
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
Rank 125 [Fri Aug 1 00:38:46 2014] [c0-1c1s12n0] application called MPI_Abort(MPI_COMM_WORLD, 1) - process 125
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
These errors also occur in CESM1.2.1. The levgrnd, levlak,levdcmp,lon,lat,are, topo are shown in the history file,but the values are zero. I can see from the lnd.log.XXXX file that retart file was successfully read and history file was successfully difined. But after that when writing history file, errors occurs. If I don't use the interpiniced initial file, there's no error. Is there anyone can help? Thank you so much!!
cesm.log.XXXXXXX
....
WARNING: water balance error nstep = 0 indexc= 1761
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 1766 3
1.682133945529015E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1167 3
1.912658951651470E-003
WARNING: water balance error nstep = 0 indexc= 507
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 1430 2
2.256971696195905E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1220 3
1.131143484683002E-003
Negative conc. in ch4tran. c,j,deficit (mol): 239 2
Negative conc. in ch4tran. c,j,deficit (mol): 301 2
3.436985812089745E-003
1.175111523888160E-003
WARNING: snow balance error nstep = 0 indexc= 384 ltype:
2 errh2osno= -1.077903423870805E-005
Negative conc. in ch4tran. c,j,deficit (mol): 60 2
2.319489647517354E-003
Negative conc. in ch4tran. c,j,deficit (mol): 60 3
1.439129437016264E-003
Negative conc. in ch4tran. c,j,deficit (mol): 328 2
1.833615839044659E-003
Negative conc. in ch4tran. c,j,deficit (mol): 328 3
1.291774594302628E-003
Negative conc. in ch4tran. c,j,deficit (mol): 383 2
3.884753156414401E-003
WARNING: water balance error nstep = 0 indexc= 550
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 342 2
Negative conc. in ch4tran. c,j,deficit (mol): 225 2
WARNING: water balance error nstep = 0 indexc= 521
1.831328459039113E-003
3.198380591750389E-003
Negative conc. in ch4tran. c,j,deficit (mol): 342 3
errh2o= -2.89526396244037
1.289461561423224E-003
Negative conc. in ch4tran. c,j,deficit (mol): 46 2
Negative conc. in ch4tran. c,j,deficit (mol): 356 2
2.210984140670391E-003
1.245439934396015E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1481 2
Negative conc. in ch4tran. c,j,deficit (mol): 1612 2
1.030888764698566E-003
1.401280647346900E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1553 2
2.249444222910866E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1494 2
1.486158061789606E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1359 3
1.394561011021509E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1443 2
Negative conc. in ch4tran. c,j,deficit (mol): 1371 3
Negative conc. in ch4tran. c,j,deficit (mol): 1569 2
3.233172429260094E-003
1.399118763440107E-003
2.444262816408948E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1534 2
1.518425181068753E-003
Negative conc. in ch4tran. c,j,deficit (mol): 1596 2
1.290672076213265E-003
Negative conc. in ch4tran. c,j,deficit (mol): 315 2
WARNING: water balance error nstep = 0 indexc= 194
1.293660990587647E-003
errh2o= -2.89526396244037
WARNING: snow balance error nstep = 0 indexc= 398 ltype:
2 errh2osno= -1.275479905027584E-005
Negative conc. in ch4tran. c,j,deficit (mol): 411 2
1.164683756181237E-003
Negative conc. in ch4tran. c,j,deficit (mol): 32 2
Negative conc. in ch4tran. c,j,deficit (mol): 211 2
Negative conc. in ch4tran. c,j,deficit (mol): 89 2
1.781484200262244E-003
1.245713043795234E-003
1.572831105360022E-003
WARNING: water balance error nstep = 0 indexc= 596
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 74 2
1.573129284062894E-003
Negative conc. in ch4tran. c,j,deficit (mol): 370 2
Negative conc. in ch4tran. c,j,deficit (mol): 253 1
1.390435996798079E-003
1.078570420300920E-003
Negative conc. in ch4tran. c,j,deficit (mol): 253 2
4.410079368585279E-003
Negative conc. in ch4tran. c,j,deficit (mol): 285 2
Negative conc. in ch4tran. c,j,deficit (mol): 103 2
1.534708914969129E-003
1.710046916626776E-003
Negative conc. in ch4tran. c,j,deficit (mol): 180 2
1.931760110182332E-003
Negative conc. in ch4tran. c,j,deficit (mol): 180 3
Negative conc. in ch4tran. c,j,deficit (mol): 397 1
1.412713945968214E-003
1.248736827103428E-003
Negative conc. in ch4tran. c,j,deficit (mol): 397 2
4.422121276022629E-003
WARNING: water balance error nstep = 0 indexc= 282
errh2o= -2.89526396244037
WARNING: water balance error nstep = 0 indexc= 27
errh2o= -2.89526396244037
WARNING: water balance error nstep = 0 indexc= 210
errh2o= -2.89526396244037
Negative conc. in ch4tran. c,j,deficit (mol): 269 2
1.458577932343643E-003
Negative conc. in ch4tran. c,j,deficit (mol): 195 2
1.397832000215802E-003
Setting mpi info: striping_factor=16
Setting mpi info: striping_unit=1048576
Negative conc. in ch4tran. c,j,deficit (mol): 1180 3
1.791996740438412E-003
Opened file ./alaska_e21.clm2.h0.1950-01-01-00000.nc to write 262144
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
Rank 1 [Fri Aug 1 00:38:46 2014] [c7-0c2s2n2] application called MPI_Abort(MPI_COMM_WORLD, 1) - process 1
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable
Rank 125 [Fri Aug 1 00:38:46 2014] [c0-1c1s12n0] application called MPI_Abort(MPI_COMM_WORLD, 1) - process 125
NetCDF: Numeric conversion not representable
pio_support::pio_die:: myrank= -1 : ERROR:
pionfwrite_mod::write_nfdarray_double: 246 :
NetCDF: Numeric conversion not representable