errors while submitting run script on linux cluster

[cathryn_meyer@yale_edu]

Hello,

I am attempting to get CCSM3.0 up and running on a linux intel xeon GBEthernet cluster. I have successfully built the model, and am now submitting the script $CASE.generic_linux.run, however I get the following output:

------------------------------------------------------------------------
/var/spool/PBS/mom_priv/jobs/12332.stora.SC: line 24: setenv: command not found
/var/spool/PBS/mom_priv/jobs/12332.stora.SC: line 50: syntax error near unexpected token `('
/var/spool/PBS/mom_priv/jobs/12332.stora.SC: line 50: `foreach n (1 2 3 4 5)'
------------------------------------------------------------------------

In the beginning of the run script, I have the line #! /bin/tcsh, so I am not sure why the setenv command is not recognized. I get the same error regardless of the shell I'm in or the syntax I use. Also, I am not sure if there is an error in the "foreach" line, or if that is the correct syntax to use. Does anybody have any ideas?

Thanks,
Cathy

 

[cathryn_meyer@yale_edu]

I seem to be having issues compiling the code $CASE.generic_linux.run. I am using mpich version 1.2.5-ch_p4 on a linux cluster described in the post above. Has anybody had to make code changes to the run script to get it to work? I get several syntax errors (more than the ones shown above) and I'm not sure how to fix them correctly. Any help in this matter would be most appreciated.

Thanks,
Cathy