Linux-intel-openmpi build problems

[cabin_jc@gmail_com]

Hello, everyone.
i met some problem in exebuild step. i tried to build CESM1.0 and CCSM4. they both didn't work.
CESM1.0:
it was stuck at the csm_share step and couldn't stop automatically without "ctrl+c" no matter "FC=mpif90 CC=mpicc" or "FC=ifort CC=icc".
eg:
Mon Oct 18 18:06:06 CST 2010 /mnt/test/test1/mct/mct.bldlog.101018-180605
Mon Oct 18 18:06:33 CST 2010 /mnt/test/test1/pio/pio.bldlog.101018-180605
Mon Oct 18 18:06:58 CST 2010 /mnt/test/test1/csm_share/csm_share.bldlog.101018-180605
vi the csm_share.bldlog, i found many missing variables.
eg:
/home/test/cesm1_0_1/models/utils/esmf_wrf_timemgr/ESMF_BaseMod.F90(672): warning #6843: A dummy argument with an explicit INTENT(OUT) declaration is not given an explicit value. [TYPE]
subroutine ESMF_AttributeGetbyNumber(anytype, number, name, type, value, rc)
/home/test/cesm1_0_1/models/utils/timing/gptl.c(2156): warning #167: argument of type "int (*)(const char **, const char **)" is incompatible with parameter of type "__compar_fn_t" qsort( sort[t], count[t], sizeof(char*), cmp );
How can i solve the problem? Thank you first!

 

[cabin_jc@gmail_com]

CCSM4:
i built CCSM4 on the same configure. i was stuck at the "ccsm.buildexe.csh"
it showed:
Mon Oct 18 18:30:33 CST 2010 /mnt/test/ccsm_test/mct/mct.bldlog.101018-183032
Mon Oct 18 18:30:59 CST 2010 /mnt/test/ccsm_test/pio/pio.bldlog.101018-183032
Mon Oct 18 18:31:24 CST 2010 /mnt/test/ccsm_test/csm_share/csm_share.bldlog.101018-183032
Mon Oct 18 18:31:44 CST 2010 /mnt/test/ccsm_test/run/cpl.bldlog.101018-183032
Mon Oct 18 18:31:44 CST 2010 /mnt/test/ccsm_test/run/atm.bldlog.101018-183032
Mon Oct 18 18:31:44 CST 2010 /mnt/test/ccsm_test/run/lnd.bldlog.101018-183032
Mon Oct 18 18:31:45 CST 2010 /mnt/test/ccsm_test/run/ice.bldlog.101018-183032
Mon Oct 18 18:31:45 CST 2010 /mnt/test/ccsm_test/run/ocn.bldlog.101018-183032
Mon Oct 18 18:31:46 CST 2010 /mnt/test/ccsm_test/run/glc.bldlog.101018-183032
Mon Oct 18 18:31:46 CST 2010 /mnt/test/ccsm_test/run/ccsm.bldlog.101018-183032
ERROR: ccsm.buildexe.csh failed, see /mnt/test/ccsm_test/run/ccsm.bldlog.101018-183032
ERROR: cat /mnt/test/ccsm_test/run/ccsm.bldlog.101018-183032
vi the ccsm.bldlog:

 

[cabin_jc@gmail_com]

Pnetcdf_path :=
inc_pnetcdf :=
lib_pnetcdf :=
lapack_libdir :=

 

[cabin_jc@gmail_com]

i solved most problems by adding the "-i_dynamic" and "-lcurl".
Now only one error exists as follows:
/opt/openmpi-1.4.2-intel/lib/libmpi_f90.so: undefined reference to `pgf90_compiled'

i don't know which parameter to add. who can help me?

 

[eaton]

The undefined reference is coming from your mpi library. It appears that libmpi_f90.so was built using pgf90 (even though the name of the directory contains the name intel which would imply that it was built using intel compilers). You need to have a version of libmpi_f90.so that is built with ifort.

 

[cabin_jc@gmail_com]

The undefined reference is coming from your mpi library. It appears that libmpi_f90.so was built using pgf90 (even though the name of the directory contains the name intel which would imply that it was built using intel compilers). You need to have a version of libmpi_f90.so that is built with ifort.

thanks, eaton.
i have solved the problem!