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no direct error in atm/lnd.log for single-point simulation,but cesm.log says the dimension error

xiaoxiaokuishu

Ru Xu
Member
Hi, all

I run a single-point simulation at lon:103.3 ,lat: -1.83 with clm5, the surdata is set as follow:
PCT_CROP=0, PCT_NATVEG=100, PCT_NAT_PFT[4]=100, so it means it is a pure 100% tropical forest site.

When I do the cold startup (acclerated ),

./xmlchange CLM_FORCE_COLDSTART=on,CLM_ACCELERATED_SPINUP=on,


the error from cesm.log , but I did not find any clue of error under atm.log and lnd.log...
NetCDF: Invalid dimension ID or name
NetCDF: Invalid dimension ID or name
NetCDF: Invalid dimension ID or name

Program received signal SIGSEGV: Segmentation fault - invalid memory reference.

Backtrace for this error:
#0 0x15137a2dcd4f in ???
#1 0xb237a5 in ???
#2 0xaa3e29 in ???
#3 0x535c3e in ???
#4 0x53e8d4 in ???
#5 0x57f287 in ???
#6 0x4addc3 in ???
#7 0x49fad1 in ???
#8 0x422894 in ???
#9 0x413c03 in ???
#10 0x407be7 in ???
#11 0x15137a2c729c in ???
#12 0x407d79 in ???
at ../sysdeps/x86_64/start.S:120
#13 0xffffffffffffffff in ???
srun: error: nid006517: task 0: Segmentation fault (core dumped)
srun: launch/slurm: _step_signal: Terminating StepId=8557614.0

Can you help to debug the error, I attach the surfdata and log file for your reference.

Best
 

Attachments

  • error-file.zip
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