adrianabossolasco
Member
Hi evryone
I was using the FSTRATMAM7 compset ( 2000_CAM5%SMA7_CLM40%CN_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV) the model run well even with my emission files, but then when I try to add the nudging files from MERRA doesn't works and I get the next error:QNEG3 from chemistry/SO2:m=126 lat/lchnk= 137 Min. mixing ratio violated at 2 points. Reset to 1.0E-36 Worst =-1.8E-12 at i,k= 16 28
QNEG3 from chemistry/NH3:m=128 lat/lchnk= 655 Min. mixing ratio violated at 4 points. Reset to 1.0E-36 Worst =-1.6E-12 at i,k= 16 26
QNEG3 from chemistry/SO2:m=126 lat/lchnk= 473 Min. mixing ratio violated at 2 points. Reset to 1.0E-36 Worst =-7.8E-12 at i,k= 8 25
QNEG3 from chemistry/NH3:m=128 lat/lchnk= 473 Min. mixing ratio violated at 9 points. Reset to 1.0E-36 Worst =-9.9E-12 at i,k= 16 25
forrtl: error (65): floating invalid
Image PC Routine Line Source
cesm.exe 00000000072D3851 Unknown Unknown Unknown
cesm.exe 00000000072D1FA7 Unknown Unknown Unknown
cesm.exe 000000000726DE94 Unknown Unknown Unknown
cesm.exe 000000000726DCA6 Unknown Unknown Unknown
cesm.exe 00000000071FBB0F Unknown Unknown Unknown
cesm.exe 0000000007205464 Unknown Unknown Unknown
libpthread.so.0 00002AAAAC0CA7E0 Unknown Unknown Unknown
libnetcdf.so.7 00002AAAAB0E3B55 Unknown Unknown Unknown
cesm.exe 000000000124A2E9 mo_neu_wetdep_mp_ 1698 mo_neu_wetdep.F90
cesm.exe 000000000122B3B1 mo_neu_wetdep_mp_ 839 mo_neu_wetdep.F90
cesm.exe 00000000012115DD mo_neu_wetdep_mp_ 380 mo_neu_wetdep.F90
cesm.exe 000000000091DEAB chemistry_mp_chem 1460 chemistry.F90
cesm.exe 0000000001B06AA5 physpkg_mp_tphysa 1396 physpkg.F90
cesm.exe 0000000001AFE72A physpkg_mp_phys_r 1131 physpkg.F90
cesm.exe 00000000006F6884 cam_comp_mp_cam_r 300 cam_comp.F90
cesm.exe 00000000006BD275 atm_comp_mct_mp_a 539 atm_comp_mct.F90
cesm.exe 00000000004B2C12 ccsm_comp_mod_mp_ 4079 ccsm_comp_mod.F90
cesm.exe 00000000004C2C42 MAIN__ 91 ccsm_driver.F90
cesm.exe 00000000004147BE Unknown Unknown Unknown
libc.so.6 00002AAAAC2F7D1D Unknown Unknown Unknown
cesm.exe 0000000000414649 Unknown Unknown Unknown
--------------------------------------------------------------------------
mpirun noticed that process rank 57 with PID 59628 on node node03 exited on signal 6 (Aborted).
--------------------------------------------------------------------------
I tought that maybe was a problem of the compset, so I create a new one (with sucess) replaced 2000 by GEOS like this: GEOS_CAM5%SMA7_CLM40%CN_CICE%PRES_DOCN%DOM_RTM_SGLC_SWABut I also get more or less the same error when I put my MEERA files:nspec= 3
l= 1 vol(l)= 2.224293719505140E-007
isw= 8 specrefindex(isw)= (1.52999997138977,4.040892235934734E-003)
specdens= 2600.00000000000
l= 2 vol(l)= 6.238961179983955E-016
isw= 8 specrefindex(isw)= (1.42163205146790,1.751226818669238E-006)
specdens= 1770.00000000000
l= 3 vol(l)= 2.342781732360044E-016
isw= 8 specrefindex(isw)= (1.42163205146790,1.751226818669238E-006)
specdens= 1770.00000000000
QNEG3 from TPHYSBCb:m=152 lat/lchnk= 257 Min. mixing ratio violated at 1 points. Reset to 1.0E-36 Worst =-5.8E+01 at i,k= 11 1
forrtl: error (65): floating invalid
Image PC Routine Line Source
cesm.exe 00000000072D3851 Unknown Unknown Unknown
cesm.exe 00000000072D1FA7 Unknown Unknown Unknown
cesm.exe 000000000726DE94 Unknown Unknown Unknown
cesm.exe 000000000726DCA6 Unknown Unknown Unknown
cesm.exe 00000000071FBB0F Unknown Unknown Unknown
cesm.exe 0000000007205464 Unknown Unknown Unknown
libpthread.so.0 00002AAAAC0CA7E0 Unknown Unknown Unknown
libnetcdf.so.7 00002AAAAB0E3B55 Unknown Unknown Unknown
cesm.exe 00000000064000BA soiltemperaturemo 1052 SoilTemperatureMod.F90
cesm.exe 00000000063D577B soiltemperaturemo 543 SoilTemperatureMod.F90
cesm.exe 0000000005D22350 biogeophysics2mod 281 Biogeophysics2Mod.F90
cesm.exe 00000000056E3A0C clm_driver_mp_clm 531 clm_driver.F90
cesm.exe 0000000005657F4B lnd_comp_mct_mp_l 589 lnd_comp_mct.F90
cesm.exe 0000000000490E1F ccsm_comp_mod_mp_ 3281 ccsm_comp_mod.F90
cesm.exe 00000000004C2C42 MAIN__ 91 ccsm_driver.F90
cesm.exe 00000000004147BE Unknown Unknown Unknown
libc.so.6 00002AAAAC2F7D1D Unknown Unknown Unknown
cesm.exe 0000000000414649 Unknown Unknown Unknown
--------------------------------------------------------------------------
mpirun noticed that process rank 42 with PID 88825 on node node04 exited on signal 6 (Aborted).
--------------------------------------------------------------------------
I don't realize where is the problem.... the cesm.log file always print this kind of error
It is possible that MAM7 have problems with nudging files??? How I can look more specifically the problem?
I really appreciate any help!
I was using the FSTRATMAM7 compset ( 2000_CAM5%SMA7_CLM40%CN_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV) the model run well even with my emission files, but then when I try to add the nudging files from MERRA doesn't works and I get the next error:QNEG3 from chemistry/SO2:m=126 lat/lchnk= 137 Min. mixing ratio violated at 2 points. Reset to 1.0E-36 Worst =-1.8E-12 at i,k= 16 28
QNEG3 from chemistry/NH3:m=128 lat/lchnk= 655 Min. mixing ratio violated at 4 points. Reset to 1.0E-36 Worst =-1.6E-12 at i,k= 16 26
QNEG3 from chemistry/SO2:m=126 lat/lchnk= 473 Min. mixing ratio violated at 2 points. Reset to 1.0E-36 Worst =-7.8E-12 at i,k= 8 25
QNEG3 from chemistry/NH3:m=128 lat/lchnk= 473 Min. mixing ratio violated at 9 points. Reset to 1.0E-36 Worst =-9.9E-12 at i,k= 16 25
forrtl: error (65): floating invalid
Image PC Routine Line Source
cesm.exe 00000000072D3851 Unknown Unknown Unknown
cesm.exe 00000000072D1FA7 Unknown Unknown Unknown
cesm.exe 000000000726DE94 Unknown Unknown Unknown
cesm.exe 000000000726DCA6 Unknown Unknown Unknown
cesm.exe 00000000071FBB0F Unknown Unknown Unknown
cesm.exe 0000000007205464 Unknown Unknown Unknown
libpthread.so.0 00002AAAAC0CA7E0 Unknown Unknown Unknown
libnetcdf.so.7 00002AAAAB0E3B55 Unknown Unknown Unknown
cesm.exe 000000000124A2E9 mo_neu_wetdep_mp_ 1698 mo_neu_wetdep.F90
cesm.exe 000000000122B3B1 mo_neu_wetdep_mp_ 839 mo_neu_wetdep.F90
cesm.exe 00000000012115DD mo_neu_wetdep_mp_ 380 mo_neu_wetdep.F90
cesm.exe 000000000091DEAB chemistry_mp_chem 1460 chemistry.F90
cesm.exe 0000000001B06AA5 physpkg_mp_tphysa 1396 physpkg.F90
cesm.exe 0000000001AFE72A physpkg_mp_phys_r 1131 physpkg.F90
cesm.exe 00000000006F6884 cam_comp_mp_cam_r 300 cam_comp.F90
cesm.exe 00000000006BD275 atm_comp_mct_mp_a 539 atm_comp_mct.F90
cesm.exe 00000000004B2C12 ccsm_comp_mod_mp_ 4079 ccsm_comp_mod.F90
cesm.exe 00000000004C2C42 MAIN__ 91 ccsm_driver.F90
cesm.exe 00000000004147BE Unknown Unknown Unknown
libc.so.6 00002AAAAC2F7D1D Unknown Unknown Unknown
cesm.exe 0000000000414649 Unknown Unknown Unknown
--------------------------------------------------------------------------
mpirun noticed that process rank 57 with PID 59628 on node node03 exited on signal 6 (Aborted).
--------------------------------------------------------------------------
I tought that maybe was a problem of the compset, so I create a new one (with sucess) replaced 2000 by GEOS like this: GEOS_CAM5%SMA7_CLM40%CN_CICE%PRES_DOCN%DOM_RTM_SGLC_SWABut I also get more or less the same error when I put my MEERA files:nspec= 3
l= 1 vol(l)= 2.224293719505140E-007
isw= 8 specrefindex(isw)= (1.52999997138977,4.040892235934734E-003)
specdens= 2600.00000000000
l= 2 vol(l)= 6.238961179983955E-016
isw= 8 specrefindex(isw)= (1.42163205146790,1.751226818669238E-006)
specdens= 1770.00000000000
l= 3 vol(l)= 2.342781732360044E-016
isw= 8 specrefindex(isw)= (1.42163205146790,1.751226818669238E-006)
specdens= 1770.00000000000
QNEG3 from TPHYSBCb:m=152 lat/lchnk= 257 Min. mixing ratio violated at 1 points. Reset to 1.0E-36 Worst =-5.8E+01 at i,k= 11 1
forrtl: error (65): floating invalid
Image PC Routine Line Source
cesm.exe 00000000072D3851 Unknown Unknown Unknown
cesm.exe 00000000072D1FA7 Unknown Unknown Unknown
cesm.exe 000000000726DE94 Unknown Unknown Unknown
cesm.exe 000000000726DCA6 Unknown Unknown Unknown
cesm.exe 00000000071FBB0F Unknown Unknown Unknown
cesm.exe 0000000007205464 Unknown Unknown Unknown
libpthread.so.0 00002AAAAC0CA7E0 Unknown Unknown Unknown
libnetcdf.so.7 00002AAAAB0E3B55 Unknown Unknown Unknown
cesm.exe 00000000064000BA soiltemperaturemo 1052 SoilTemperatureMod.F90
cesm.exe 00000000063D577B soiltemperaturemo 543 SoilTemperatureMod.F90
cesm.exe 0000000005D22350 biogeophysics2mod 281 Biogeophysics2Mod.F90
cesm.exe 00000000056E3A0C clm_driver_mp_clm 531 clm_driver.F90
cesm.exe 0000000005657F4B lnd_comp_mct_mp_l 589 lnd_comp_mct.F90
cesm.exe 0000000000490E1F ccsm_comp_mod_mp_ 3281 ccsm_comp_mod.F90
cesm.exe 00000000004C2C42 MAIN__ 91 ccsm_driver.F90
cesm.exe 00000000004147BE Unknown Unknown Unknown
libc.so.6 00002AAAAC2F7D1D Unknown Unknown Unknown
cesm.exe 0000000000414649 Unknown Unknown Unknown
--------------------------------------------------------------------------
mpirun noticed that process rank 42 with PID 88825 on node node04 exited on signal 6 (Aborted).
--------------------------------------------------------------------------
I don't realize where is the problem.... the cesm.log file always print this kind of error
It is possible that MAM7 have problems with nudging files??? How I can look more specifically the problem?
I really appreciate any help!