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Problems with CLM3.5

I am trying to run CLM3.5 and I have problems with PBS that is used in run-script and the problems imerged with msrcp command. The error that appeared is this :

History tape 1 write frequency = 48
All fields on history tape 1 are grid averaged
Number of time samples on history tape 1 is 1
Output precision on history tape 1 = 2

Successfully initialized clm2 history files
------------------------------------------------------------
Successfully initialized the land model
begin initial run at:
nstep= 1 year= 2003 month= 1 day=
1 seconds= 1800

************************************************************

Attempting to set up atmospheric grid
(GETFIL): attempting to find local file 2003-01.nc
/bin/cp: cannot stat `/mnt/skiron5/chrispana/CLM3.5/inputdata/lnd/clm2/NCEPDATA.Qian.T62.c051024/2003-01.nc': No such file or directory
(shr_file_get) rcode =256 cmd = /bin/cp -f /mnt/skiron5/chrispana/CLM3.5/inputdata/lnd/clm2/NCEPDATA.Qian.T62.c051024/2003-01.nc 2003-01.nc
(GETFIL): failed getting file from full path:
/mnt/skiron5/chrispana/CLM3.5/inputdata/lnd/clm2/NCEPDATA.Qian.T62.c051024/2003-01.nc
ENDRUN:
GETFIL: FAILED to get /mnt/skiron5/chrispana/CLM3.5/inputdata/lnd/clm2/NCEPDATA.Qian.T62.c051024/2003-01.nc
[0] MPI Abort by user Aborting program !
[0] Aborting program!
p0_10040: p4_error: : 1

Any suggestions

Thanks............
 

slevis

Moderator
The error message says:
"[...] 2003-01.nc': No such file or directory [...]"
Are you sure the file is visible to the model?

If it is, then you are probably running on a platform where the msrcp or cp command will not work, and you need to make changes to get it to work on your platform.

Sam Levis
 
Thanks very much, I run the dump thing yesterday and I am very happy. I want to ask you something. CLM3.5 is a very new version and user and technical documentation is not available. I want to add all the biochemistry in the model carbon, nitrogen, and iron cycles and I do not know to add these output variables to model output run.

Thanks...
 
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