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Soil Moisture Initial Condition

K

koushanm

Koushan Mohammadi
New Member
Hello
I am trying to change the SM initial condition. Here is my user_nl_clm
koushanm@derecho3:~/cases/July_14_USA_Centeral_MODIS_SP_FixLAI_Ofixed_InitSM2012> vi user_nl_clm

finidat = "/glade/derecho/scratch/koushanm/archive/July_10_USA_Centeral_MODIS_SP_FixLAI_Ofixed_Regular/rest/modified_restart.nc"
use_init_interp = .true.

Here is the error in the log file:
koushanm@derecho3:/glade/derecho/scratch/koushanm/July_14_USA_Centeral_MODIS_SP_FixLAI_Ofixed_InitSM2012/run> vi cesm.log.1934229.desched1.250713-223915
dec1985.hsn.de.hpc.ucar.edu 1: PIO2 pio_file.c retry NETCDF
dec1985.hsn.de.hpc.ucar.edu 1: PIO2 pio_file.c retry NETCDF
dec1985.hsn.de.hpc.ucar.edu 0: PIO2 pio_file.c retry NETCDF
dec1985.hsn.de.hpc.ucar.edu 1: PIO2 pio_file.c retry NETCDF
dec1989.hsn.de.hpc.ucar.edu 313: WARNING: column-level water balance error nstep= 0 local indexc=
dec1989.hsn.de.hpc.ucar.edu 313: 227 global indexc= 22094 errh2o= -6.902813435340968E-002
dec1989.hsn.de.hpc.ucar.edu 313: WARNING: grid cell-level water balance error nstep= 0
dec1989.hsn.de.hpc.ucar.edu 313: local indexg= 8 errh2o_grc= -1.329553856105986E-002
dec1989.hsn.de.hpc.ucar.edu 304: WARNING: column-level water balance error nstep= 0 local indexc=
dec1989.hsn.de.hpc.ucar.edu 304: 43 global indexc= 89657 errh2o= 1.080408457964782E-004
dec1989.hsn.de.hpc.ucar.edu 304: WARNING: grid cell-level water balance error nstep= 0
dec1989.hsn.de.hpc.ucar.edu 304: local indexg= 43 errh2o_grc= 8.712470634243685E-005
dec1989.hsn.de.hpc.ucar.edu 383: WARNING: column-level water balance error nstep= 0 local indexc=
dec1989.hsn.de.hpc.ucar.edu 383: 79 global indexc= 173673 errh2o= 9.794236348347612E-005
dec1989.hsn.de.hpc.ucar.edu 383: WARNING: grid cell-level water balance error nstep= 0
dec1989.hsn.de.hpc.ucar.edu 383: local indexg= 79 errh2o_grc= 4.665802626460658E-005
dec1989.hsn.de.hpc.ucar.edu 314: WARNING: column-level water balance error nstep= 0 local indexc=
dec1989.hsn.de.hpc.ucar.edu 314: 300 global indexc= 171878 errh2o= -1.632895815244645E-004

When I debugged the code

dec1985.hsn.de.hpc.ucar.edu 1: PIO2 pio_file.c retry NETCDF
dec1985.hsn.de.hpc.ucar.edu 0: shr_file_mod.F90 913
dec1985.hsn.de.hpc.ucar.edu 0: This routine is depricated - use shr_log_setLogUnit instead -132
dec1990.hsn.de.hpc.ucar.edu 404: CheckSnowConsistency ERROR: col has non-zero h2osoi_ice or h2osoi_liq outside r
dec1990.hsn.de.hpc.ucar.edu 404: esolved snow layers
dec1990.hsn.de.hpc.ucar.edu 404: (Called from: lnd2atm_minimal: bulk)
dec1990.hsn.de.hpc.ucar.edu 404: c, j, snl, h2osoi_ice, h2osoi_liq = 1 -11 0
dec1990.hsn.de.hpc.ucar.edu 404: 0.000000000000000E+000 8.17882563155855
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: local column index = 1
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: global column index = 10727
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: global landunit index = 6407
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: global gridcell index = 2581
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: gridcell longitude = 269.0250000
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: gridcell latitude = 33.2750000
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: column type = 1
dec1990.hsn.de.hpc.ucar.edu 404: iam = 404: landunit type = 1
dec1990.hsn.de.hpc.ucar.edu 404: ENDRUN:
dec1990.hsn.de.hpc.ucar.edu 404: ERROR:
dec1990.hsn.de.hpc.ucar.edu 404: CheckSnowConsistency ERROR: col has non-zero h2osoi_ice or h2osoi_liq outside r
dec1990.hsn.de.hpc.ucar.edu 404: esolved snow layers
dec1990.hsn.de.hpc.ucar.edu 509: CheckSnowConsistency ERROR: col has non-zero h2osoi_ice or h2osoi_liq outside r
dec1990.hsn.de.hpc.ucar.edu 509: esolved snow layers
dec1990.hsn.de.hpc.ucar.edu 509: (Called from: lnd2atm_minimal: bulk)
dec1990.hsn.de.hpc.ucar.edu 509: c, j, snl, h2osoi_ice, h2osoi_liq = 1 -11 0
dec1990.hsn.de.hpc.ucar.edu 509: 0.000000000000000E+000 5.72314531309988
dec1990.hsn.de.hpc.ucar.edu 509: iam = 509: local column index = 1
dec1990.hsn.de.hpc.ucar.edu 509: iam = 509: global column index = 13169
dec1990.hsn.de.hpc.ucar.edu 509: iam = 509: global landunit index = 8013

I used "SOILLIQ", "SOILICE" model output to create the initial soil moisture; however, the model output is in (levsoi, lat, lon) format. I am not sure how to fix my file
 
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