I am trying an out of box CLM run from 1.5.5. Spinup of CLM5.0-BGC-Crop — ctsm CTSM master documentation
proceeded with ./case.build then received build error
Building case in directory /home/clm/cime/scripts/BGC_spinup
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
Calling /home/clm/cime/src/components/data_comps/datm/cime_config/buildnml
Calling /home/clm//cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sice/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/socn/cime_config/buildnml
Calling /home/clm/components/mosart//cime_config/buildnml
Generating component namelists as part of build
Creating component namelists
Calling /home/clm/src/components/data_comps/datm/cime_config/buildnml
Calling /home/clm/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sice/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/socn/cime_config/buildnml
Calling /home/clm/components/mosart//cime_config/buildnml
Running /home/clm/components/cism//cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/swav/cime_config/buildnml
Running /home/clm/cime/src/components/stub_comps/siac/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sesp/cime_config/buildnml
Calling /home/clm/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /home/CASE_DIR/BGC_spinup/bld/gptl.bldlog.210920-195330
Calling /home/clm/cime/src/build_scripts/buildlib.gptl
ERROR: /home/clm/cime/src/build_scripts/buildlib.gptl FAILED, cat /home/clm/cime/src/build_scripts/buildlib.gptl
proceeded with ./case.build then received build error
Building case in directory /home/clm/cime/scripts/BGC_spinup
sharedlib_only is False
model_only is False
Generating component namelists as part of build
Creating component namelists
Calling /home/clm/cime/src/components/data_comps/datm/cime_config/buildnml
Calling /home/clm//cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sice/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/socn/cime_config/buildnml
Calling /home/clm/components/mosart//cime_config/buildnml
Generating component namelists as part of build
Creating component namelists
Calling /home/clm/src/components/data_comps/datm/cime_config/buildnml
Calling /home/clm/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sice/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/socn/cime_config/buildnml
Calling /home/clm/components/mosart//cime_config/buildnml
Running /home/clm/components/cism//cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/swav/cime_config/buildnml
Running /home/clm/cime/src/components/stub_comps/siac/cime_config/buildnml
Calling /home/clm/cime/src/components/stub_comps/sesp/cime_config/buildnml
Calling /home/clm/cime/src/drivers/mct/cime_config/buildnml
Finished creating component namelists
Building gptl with output to file /home/CASE_DIR/BGC_spinup/bld/gptl.bldlog.210920-195330
Calling /home/clm/cime/src/build_scripts/buildlib.gptl
ERROR: /home/clm/cime/src/build_scripts/buildlib.gptl FAILED, cat /home/clm/cime/src/build_scripts/buildlib.gptl