rambhari0123@gmail_com
Member
Dear CESM Users,
I am running the cesm1.2.0 for a compset equvalant to F compset for RCP85 emission scenario. I created the case using the following command lines.create_newcase -case HadGEM2_RCP85_r3i1p1_9x125_2006-2099 -res f09_f09 -user_compset RCP8_CAM5_CLM40%SP_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV -mach IITD -mpilib mpich -compiler pgi I am supplying the boundary conditons created using CMIP5 HadGEM2-ES output ts and sic and cesm boundary conditons file (sst_HadOIBl_bc_0.9x1.25_1850_2013_c140701.nc). I had added the model climatological bias(from obs where ss_HadOIB is treated as obs) for present day period (1970-1990) to the future ts and sice from of HadGEM2-ES model output of RCP85.I started the case from 2006 to 2099, model runs sucessful upto 2090-12-31 but it stuck at 2091-01 (in January month). cesm log file gives the following error message.-------------------------------------------------------------------------------------------------------------------------CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
17
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
27
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
27
imp_sol: Time step 1.8000000000000E+03 failed to converge @ (lchnk,lev,col,nstep) = 4938 19 2******
imp_sol : @ (lchnk,lev,col) = 4938 19 2 failed
1 times
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
20
QNEG3 from chemistry/num_a2:m= 21 lat/lchnk= 4323 Min. mixing ratio violated at 15 points. Reset to 1.0E-36 Worst =-1.5E-08 at i,k= 2 20
QNEG3 from chemistry/num_a2:m= 21 lat/lchnk= 4324 Min. mixing ratio violated at 16 points. Reset to 1.0E-36 Worst =-1.5E-08 at i,k= 2 20
--------------------------------------------------------------------------
WARNING: A process refused to die despite all the efforts!
This process may still be running and/or consuming resources.
Host: cn126
PID: 12104
--------------------------------------------------------------------------
[cn126:12078] 23 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 143 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 214 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 96 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 24 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 143 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 120 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 72 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 48 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 71 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 24 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
--------------------------------------------------------------------------
mpirun noticed that process rank 124 with PID 0 on node cn162.hpc.iitd.ac.in exited on signal 11 (Segmentation fault).
--------------------------------------------------------------------------
[cn126:12078] 23 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
---------------------------------------------------------------------------I am attaching the full log file here the snapshot of 2091-01-15 boundary condition SST and model original TS values here. I am also attaching the logfile. Please look suggest source of error.Regards,
I am running the cesm1.2.0 for a compset equvalant to F compset for RCP85 emission scenario. I created the case using the following command lines.create_newcase -case HadGEM2_RCP85_r3i1p1_9x125_2006-2099 -res f09_f09 -user_compset RCP8_CAM5_CLM40%SP_CICE%PRES_DOCN%DOM_RTM_SGLC_SWAV -mach IITD -mpilib mpich -compiler pgi I am supplying the boundary conditons created using CMIP5 HadGEM2-ES output ts and sic and cesm boundary conditons file (sst_HadOIBl_bc_0.9x1.25_1850_2013_c140701.nc). I had added the model climatological bias(from obs where ss_HadOIB is treated as obs) for present day period (1970-1990) to the future ts and sice from of HadGEM2-ES model output of RCP85.I started the case from 2006 to 2099, model runs sucessful upto 2090-12-31 but it stuck at 2091-01 (in January month). cesm log file gives the following error message.-------------------------------------------------------------------------------------------------------------------------CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
17
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
27
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
27
imp_sol: Time step 1.8000000000000E+03 failed to converge @ (lchnk,lev,col,nstep) = 4938 19 2******
imp_sol : @ (lchnk,lev,col) = 4938 19 2 failed
1 times
CALEDDY: Warning, CL with zero TKE, i, kt, kb 2 5
20
QNEG3 from chemistry/num_a2:m= 21 lat/lchnk= 4323 Min. mixing ratio violated at 15 points. Reset to 1.0E-36 Worst =-1.5E-08 at i,k= 2 20
QNEG3 from chemistry/num_a2:m= 21 lat/lchnk= 4324 Min. mixing ratio violated at 16 points. Reset to 1.0E-36 Worst =-1.5E-08 at i,k= 2 20
--------------------------------------------------------------------------
WARNING: A process refused to die despite all the efforts!
This process may still be running and/or consuming resources.
Host: cn126
PID: 12104
--------------------------------------------------------------------------
[cn126:12078] 23 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 143 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 214 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 96 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 24 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 143 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 120 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 72 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 48 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 71 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 24 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
[cn126:12078] 1 more process has sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
--------------------------------------------------------------------------
mpirun noticed that process rank 124 with PID 0 on node cn162.hpc.iitd.ac.in exited on signal 11 (Segmentation fault).
--------------------------------------------------------------------------
[cn126:12078] 23 more processes have sent help message help-orte-odls-base.txt / orte-odls-base:could-not-kill
---------------------------------------------------------------------------I am attaching the full log file here the snapshot of 2091-01-15 boundary condition SST and model original TS values here. I am also attaching the logfile. Please look suggest source of error.Regards,