Hi Paleo Group,
When I submit the regridbatch_paleo.sh script to the queue I keep receiving a "no mpiexec_mpt" or "mpiexec_mpt: command not found" error.
I've used the updated lnd paleotool which uses these sets of modules
##cheyenne
chey* | r* )
module load intel/17.0.1
module load esmf_libs/7.0.0
module load esmf-7.0.0-ncdfio-mpi-O
module load nco
ESMFBIN_PATH=/glade/u/apps/ch/opt/esmf/7.0.0-ncdfio-mpi/intel/17.0.1/bin/binO/Linux.intel.64.mpi.default
MPIEXEC="mpiexec_mpt"
;;
As well as an updated intel and
##cheyenne
chey* | r* )
module load nco
module load intel/18.0.5
module load esmf_libs/8.0.0
module load esmf-8.0.0-ncdfio-mpi-O
ESMFBIN_PATH=/glade/u/apps/ch/opt/esmf/8.0.0/intel/18.0.5/bin/binO/Linux.intel.64.mpiuni.default/
MPIEXEC="mpiexec_mpt"
;
but both results in the same error as shown below.
which: no mpiexec_mpt in (/glade/u/apps/ch/opt/nco/4.7.9/gnu/8.3.0/bin:/glade/u/apps/ch/opt/esmf/7.0.0-ncdfio-mpi/intel/17.0.1/bin/binO/Linux.intel.64.mpi.default:/glade/u/apps/ch/opt/ncl/6.6.2/intel/17.0.1/bin:/glade/u/apps/ch/opt/netcdf/4.6.3/intel/17.0.1/bin:/glade/u/apps/ch/opt/ncarcompilers/0.5.0/intel/17.0.1:/glade/u/apps/ch/opt/ncarcompilers/0.5.0/intel/17.0.1/mpi:/glade/u/apps/opt/intel/2017u1/vtune_amplifier/bin64:/glade/u/apps/opt/intel/2017u1/inspector/bin64:/glade/u/apps/opt/intel/2017u1/advisor/bin64:/glade/u/apps/opt/intel/2017u1/compilers_and_libraries/linux/bin/intel64:/glade/u/apps/ch/opt/python/3.6.8/gnu/8.3.0/bin:/glade/u/apps/opt/vncmgr:/glade/u/apps/opt/globus-utils:/glade/u/apps/ch/opt/usr/bin:/glade/u/apps/ch/opt/ncview/2.1.7/gnu/8.3.0/bin:/glade/u/apps/ch/opt/lmod/8.1.7/bin:/ncar/opt/slurm/latest/bin:/opt/clmgr/sbin:/opt/clmgr/bin:/opt/sgi/sbin:/opt/sgi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/bin/X11:/usr/games:/opt/ibutils/bin:/usr/lib/mit/bin:/opt/pbs/bin:/glade/u/apps/opt/hpss/hpss-client.5.0.2.p5/bin:/glade/u/apps/ch/os/usr/bin)
./mkmapdata_eo2mio.sh: line 123: mpiexec_mpt: command not found
Thank you in advance,
R. Paul Acosta
Post Doctoral Fellow,
Earth & Environmental Sciences
University of Michigan
When I submit the regridbatch_paleo.sh script to the queue I keep receiving a "no mpiexec_mpt" or "mpiexec_mpt: command not found" error.
I've used the updated lnd paleotool which uses these sets of modules
##cheyenne
chey* | r* )
module load intel/17.0.1
module load esmf_libs/7.0.0
module load esmf-7.0.0-ncdfio-mpi-O
module load nco
ESMFBIN_PATH=/glade/u/apps/ch/opt/esmf/7.0.0-ncdfio-mpi/intel/17.0.1/bin/binO/Linux.intel.64.mpi.default
MPIEXEC="mpiexec_mpt"
;;
As well as an updated intel and
##cheyenne
chey* | r* )
module load nco
module load intel/18.0.5
module load esmf_libs/8.0.0
module load esmf-8.0.0-ncdfio-mpi-O
ESMFBIN_PATH=/glade/u/apps/ch/opt/esmf/8.0.0/intel/18.0.5/bin/binO/Linux.intel.64.mpiuni.default/
MPIEXEC="mpiexec_mpt"
;
but both results in the same error as shown below.
which: no mpiexec_mpt in (/glade/u/apps/ch/opt/nco/4.7.9/gnu/8.3.0/bin:/glade/u/apps/ch/opt/esmf/7.0.0-ncdfio-mpi/intel/17.0.1/bin/binO/Linux.intel.64.mpi.default:/glade/u/apps/ch/opt/ncl/6.6.2/intel/17.0.1/bin:/glade/u/apps/ch/opt/netcdf/4.6.3/intel/17.0.1/bin:/glade/u/apps/ch/opt/ncarcompilers/0.5.0/intel/17.0.1:/glade/u/apps/ch/opt/ncarcompilers/0.5.0/intel/17.0.1/mpi:/glade/u/apps/opt/intel/2017u1/vtune_amplifier/bin64:/glade/u/apps/opt/intel/2017u1/inspector/bin64:/glade/u/apps/opt/intel/2017u1/advisor/bin64:/glade/u/apps/opt/intel/2017u1/compilers_and_libraries/linux/bin/intel64:/glade/u/apps/ch/opt/python/3.6.8/gnu/8.3.0/bin:/glade/u/apps/opt/vncmgr:/glade/u/apps/opt/globus-utils:/glade/u/apps/ch/opt/usr/bin:/glade/u/apps/ch/opt/ncview/2.1.7/gnu/8.3.0/bin:/glade/u/apps/ch/opt/lmod/8.1.7/bin:/ncar/opt/slurm/latest/bin:/opt/clmgr/sbin:/opt/clmgr/bin:/opt/sgi/sbin:/opt/sgi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/bin/X11:/usr/games:/opt/ibutils/bin:/usr/lib/mit/bin:/opt/pbs/bin:/glade/u/apps/opt/hpss/hpss-client.5.0.2.p5/bin:/glade/u/apps/ch/os/usr/bin)
./mkmapdata_eo2mio.sh: line 123: mpiexec_mpt: command not found
Thank you in advance,
R. Paul Acosta
Post Doctoral Fellow,
Earth & Environmental Sciences
University of Michigan