CLUBB simulation

[prathamandwal@gmail_com]

Hello all,I am  a beginner to CESM . Can anyone tell me how to build and run CLUBB .Also I tried to create a compset using FC5CLUBB alias ,But i am getting the following set of error while building the case Thanks in advancePratha     Wed Sep 9 12:33:48 IST 2015 /home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/cesm.bldlog.150909-112858
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 Building a single executable version of CESM
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cat: Srcfiles: No such file or directory
/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/Tools/mkSrcfiles
cp -f /storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/cesm/obj/Filepath /storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/cesm/obj/Deppath
/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/Tools/mkDepends  Deppath Srcfiles > /storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/cesm/obj/Depends
mpiifort  -c -I.  -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/storage/softwares/installedsoftware/netcdf_4.4.0/include -I/opt/intel/impi/5.0.3.048/intel64/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/atm/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lnd/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ice/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ocn/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/glc/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/rof/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/wav/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/storage/home/pratha/newcesm/cesm1_2_2/models/csm_share/shr -I. -I/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/SourceMods/src.drv -I/storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lib/include  -fp-model strict -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs  -O2  -openmp  -DNUM_COMP_INST_ATM=1 -DNUM_COMP_INST_LND=1 -DNUM_COMP_INST_OCN=1 -DNUM_COMP_INST_ICE=1 -DNUM_COMP_INST_GLC=1 -DNUM_COMP_INST_WAV=1 -Dlinux  -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DTHREADED_OMP -DFORTRANUNDERSCORE -DNO_R16 -Dlinux -DCPRINTEL  -free   /storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver/seq_diag_mct.F90
mpiifort  -c -I.  -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/storage/softwares/installedsoftware/netcdf_4.4.0/include -I/opt/intel/impi/5.0.3.048/intel64/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/atm/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lnd/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ice/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ocn/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/glc/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/rof/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/wav/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/storage/home/pratha/newcesm/cesm1_2_2/models/csm_share/shr -I. -I/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/SourceMods/src.drv -I/storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lib/include  -fp-model strict -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs  -O2  -openmp  -DNUM_COMP_INST_ATM=1 -DNUM_COMP_INST_LND=1 -DNUM_COMP_INST_OCN=1 -DNUM_COMP_INST_ICE=1 -DNUM_COMP_INST_GLC=1 -DNUM_COMP_INST_WAV=1 -Dlinux  -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DTHREADED_OMP -DFORTRANUNDERSCORE -DNO_R16 -Dlinux -DCPRINTEL  -free   /storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver/seq_map_esmf.F90
mpiifort  -c -I.  -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/storage/softwares/installedsoftware/netcdf_4.4.0/include -I/opt/intel/impi/5.0.3.048/intel64/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/atm/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lnd/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ice/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ocn/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/glc/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/rof/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/wav/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/storage/home/pratha/newcesm/cesm1_2_2/models/csm_share/shr -I. -I/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/SourceMods/src.drv -I/storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lib/include  -fp-model strict -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs  -O2  -openmp  -DNUM_COMP_INST_ATM=1 -DNUM_COMP_INST_LND=1 -DNUM_COMP_INST_OCN=1 -DNUM_COMP_INST_ICE=1 -DNUM_COMP_INST_GLC=1 -DNUM_COMP_INST_WAV=1 -Dlinux  -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DTHREADED_OMP -DFORTRANUNDERSCORE -DNO_R16 -Dlinux -DCPRINTEL  -free   /storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver/mrg_mod.F90
mpiifort  -c -I.  -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/storage/softwares/installedsoftware/netcdf_4.4.0/include -I/opt/intel/impi/5.0.3.048/intel64/include -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/atm/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lnd/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ice/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/ocn/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/glc/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/rof/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/wav/obj -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/intel/mpich/nodebug/nothreads/include -I/storage/home/pratha/newcesm/cesm1_2_2/models/csm_share/shr -I. -I/storage/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/SourceMods/src.drv -I/storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver -I/home/pratha/newcesm/cesm1_2_2/cases/clubb_case/exe/lib/include  -fp-model strict -convert big_endian -assume byterecl -ftz -traceback -assume realloc_lhs  -O2  -openmp  -DNUM_COMP_INST_ATM=1 -DNUM_COMP_INST_LND=1 -DNUM_COMP_INST_OCN=1 -DNUM_COMP_INST_ICE=1 -DNUM_COMP_INST_GLC=1 -DNUM_COMP_INST_WAV=1 -Dlinux  -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DTHREADED_OMP -DFORTRANUNDERSCORE -DNO_R16 -Dlinux -DCPRINTEL  -free   /storage/home/pratha/newcesm/cesm1_2_2/models/drv/driver/seq_avdata_mod.F90
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[cacraig]

To build a CESM job using CLUBB, follow the directions at:http://www.cesm.ucar.edu/models/cesm1.2/cesm/doc/usersguide/x382.htmlSetting the compset of FC5CLUBB in the create_newcase command will build and use CLUBB in the simulation.If the run failed in the building of cesm, please upload the cesm_bldlog file.  The snippet that was included in this posting looks like a normal build of CESM and I do not see any error so far.

 

[cacraig]

To build a CESM job using CLUBB, follow the directions at:http://www.cesm.ucar.edu/models/cesm1.2/cesm/doc/usersguide/x382.htmlSetting the compset of FC5CLUBB in the create_newcase command will build and use CLUBB in the simulation.If the run failed in the building of cesm, please upload the cesm_bldlog file.  The snippet that was included in this posting looks like a normal build of CESM and I do not see any error so far.