error in running ccsm4.0

[devarajun@gmail_com]

Hi,

I am trying to run CCSM4.0 on Regatta,but getting error below while submitting the
'devclm4.generic_ibm.run' script.I am new to this field and really I don't
know much about it. I hope you can help me or give any suggestions to correct
the errors in running the model.

INFO: 0031-364 Contacting LoadLeveler to query information for batch job
INFO: 0031-119 Host regatta3 allocated for task 0
ATTENTION: 0031-606 Unrecognized environment variable, MP_RC_USE_LMC.
ATTENTION: 0031-606 Unrecognized environment variable, MP_BULK_MIN_MSG_SIZE.
ATTENTION: 0031-606 Unrecognized environment variable, MP_SYNC_QP.
ATTENTION: 0031-606 Unrecognized environment variable, MP_RFIFO_SIZE.
ATTENTION: 0031-606 Unrecognized environment variable, MP_SHM_ATTACH_THRESH.
ATTENTION: 0031-606 Unrecognized environment variable, MP_USE_BULK_XFER.
ATTENTION: 0031-606 Unrecognized environment variable, MP_RC_MAX_QP.
0:INFO: 0031-724 Executing program:
0:INFO: 0031-619 64bit(us) MPCI library was compiled at Thu Apr 3 12:32:04 2003
0:
0:ERROR: 0031-303 mp_euilib specifies us, css library loaded is not us.
0:INFO: 0031-306 pm_atexit: pm_exit_value is 1.
INFO: 0031-656 I/O file STDOUT closed by task 0
INFO: 0031-656 I/O file STDERR closed by task 0
INFO: 0031-251 task 0 exited: rc=1
INFO: 0031-639 Exit status from pm_respond = 0


I will be very much grateful if you find time for me. Looking eagerly for
positive reply.

Thanking you,
Dev

 

[eaton]

I'd try removing all the settings in the env_machopts.generic_ibm file after the line

# MPI Environment

These settings are specific to the power6 platform at NCAR and may not be appropriate for your platform.

 

[devarajun@gmail_com]

Hi eaton
Thanks. I commented all MPI environments, now the error is clear. But I am getting a different error now as follwoing:
vi atm.log.101012-180625

(datm_comp_init) atm_in = datm_atm_in
(datm_comp_init) decomp = 1d
(datm_comp_init) iradsw = 1
(datm_comp_init) factorFn = unused
(datm_comp_init) restfilm = undefined
(datm_comp_init) restfils = undefined
(shr_strdata_readnml) reading input namelist file: datm_atm_in
(datm_comp_init) atm mode = CLMNCEP
(shr_stream_init) Reading file clm_qian.T62.stream.Solar.txt
(shr_file_freeUnit) unit 12 was not in use
(shr_stream_init) Reading file clm_qian.T62.stream.Precip.txt
(shr_file_freeUnit) unit 12 was not in use
(shr_stream_init) Reading file clm_qian.T62.stream.TPQW.txt
(shr_file_freeUnit) unit 12 was not in use
(shr_strdata_init) calling shr_dmodel_mapSet for fill
(shr_strdata_init) calling shr_dmodel_mapSet for remap
(shr_strdata_init) calling shr_dmodel_mapSet for fill
(shr_strdata_init) calling shr_dmodel_mapSet for remap
(shr_strdata_init) calling shr_dmodel_mapSet for fill
(shr_strdata_init) calling shr_dmodel_mapSet for remap
(shr_strdata_print) ----------------------------------------------------------
(shr_strdata_print) name = ATM data
(shr_strdata_print) dataMode = CLMNCEP
(shr_strdata_print) domainFile = /home/caos2/casgbala/dev/inputdata_ccsm4/atm/datm7/domain.lnd.fv0.9x1.25_gx1v6.090309.nc
(shr_strdata_print) nxg = 288
(shr_strdata_print) nyg = 192
(shr_strdata_print) io_type = 6
(shr_strdata_print) num_iotasks = 1
(shr_strdata_print) io_root = 0
(shr_strdata_print) io_stride = 4
(shr_strdata_print) num_agg = 0
(shr_strdata_print) eccen = 1.670772E-02
(shr_strdata_print) mvelpp = 4.934468E+00
(shr_strdata_print) lambm0 = -3.250364E-02
(shr_strdata_print) obliqr = 4.091238E-01
(shr_strdata_print) nstreams = 3
(shr_strdata_print) obliqr = 4.091238E-01
(shr_strdata_print) nstreams = 3
(shr_strdata_print) streams ( 1) = clm_qian.T62.stream.Solar.txt 1 2003 2003
(shr_strdata_print) strnxg ( 1) = 192
(shr_strdata_print) strnyg ( 1) = 94
(shr_strdata_print) dofill ( 1) = T
(shr_strdata_print) fillalgo( 1) = nn
(shr_strdata_print) fillmask( 1) = nomask
(shr_strdata_print) fillread( 1) = NOT_SET
(shr_strdata_print) fillwrit( 1) = NOT_SET
(shr_strdata_print) domaps ( 1) = T
(shr_strdata_print) mapalgo ( 1) = bilinear
(shr_strdata_print) mapmask ( 1) = nomask
(shr_strdata_print) mapread ( 1) = NOT_SET
(shr_strdata_print) mapwrit ( 1) = NOT_SET
(shr_strdata_print) tintalgo( 1) = coszen
(shr_strdata_print)
(shr_strdata_print) streams ( 2) = clm_qian.T62.stream.Precip.txt 1 2003 2003
(shr_strdata_print) strnxg ( 2) = 192
(shr_strdata_print) strnyg ( 2) = 94
(shr_strdata_print) dofill ( 2) = T
(shr_strdata_print) fillalgo( 2) = nn
(shr_strdata_print) fillmask( 2) = nomask
(shr_strdata_print) fillread( 2) = NOT_SET
(shr_strdata_print) fillwrit( 2) = NOT_SET
(shr_strdata_print) domaps ( 2) = T
(shr_strdata_print) mapalgo ( 2) = bilinear
(shr_strdata_print) mapmask ( 2) = nomask
(shr_strdata_print) mapread ( 2) = NOT_SET
(shr_strdata_print) mapwrit ( 2) = NOT_SET
(shr_strdata_print) tintalgo( 2) = nearest
(shr_strdata_print)
(shr_strdata_print) streams ( 3) = clm_qian.T62.stream.TPQW.txt 1 2003 2003
(shr_strdata_print) strnxg ( 3) = 192
(shr_strdata_print) strnyg ( 3) = 94
(shr_strdata_print) dofill ( 3) = T
(shr_strdata_print) strnyg ( 3) = 94
(shr_strdata_print) dofill ( 3) = T
(shr_strdata_print) fillalgo( 3) = nn
(shr_strdata_print) fillmask( 3) = nomask
(shr_strdata_print) fillread( 3) = NOT_SET
(shr_strdata_print) fillwrit( 3) = NOT_SET
(shr_strdata_print) domaps ( 3) = T
(shr_strdata_print) mapalgo ( 3) = bilinear
(shr_strdata_print) mapmask ( 3) = nomask
(shr_strdata_print) mapread ( 3) = NOT_SET
(shr_strdata_print) mapwrit ( 3) = NOT_SET
(shr_strdata_print) tintalgo( 3) = linear
(shr_strdata_print)
(shr_strdata_print) nvectors = 0
(shr_strdata_print) ----------------------------------------------------------
(datm_comp_init) initialize gsmaps
(datm_comp_init) copy domains
(datm_comp_init) allocate AVs
(datm_comp_init) flds_strm = strm_swdn:strm_precn:strm_tbot:strm_wind:strm_pbot:strm_shum
(shr_sys_abort) ERROR: (shr_stream_readTCoord) ERROR: nf90_open
(shr_sys_abort) WARNING: calling shr_mpi_abort() and stopping


Please help me out. Thanks

 

[eaton]

This error is coming from the data atmosphere component (which I am not familiar with). You might want to post this to the land model/CLM forum.