Generating mapping files using mkmapdata.sh with UGRID format error

[Fuhow]

Hello there, I found an error while generating mapping files during adding a new resolution:

My CESM machine has 500GB memory, I ran the command: ./mkmapdata.sh -r $GRIDNAME -f $GRIDFILE -t regional, ESMF can generate mapping files for SCRIP format files, but returned:

Attempting to use an MPI routine before initializing MPICH
Error status returned from mkmapdata script



the mapping files from SCRIP format grid files are listed:

The log file shows nothing:


The information returned with no spefic error even in the log file, any advice will be much appreciated.

 

[Fuhow]

Hi, I have solved this error, it's about my environment setting during ESMF installing. Now, I am going to share my environment setting under the newest ESMF version.

ESMF_DIR=/home/user/Downloads/esmf-8.6.0
ESMF_NETCDF_LIBS="-lnetcdf -lnetcdff"
ESMF_COMPILER=intel
ESMF_INSTALL_PREFIX=/home/user/app/esmf/
ESMF_PIO="internal"
ESMF_PIO_INCLUDE=/home/user/app/ParallelIO/include/
ESMF_PNETCDF_LIBPATH=/home/user/netcdf-intel/lib/
ESMFBIN_PATH=/home/user/app/esmf/bin/binO/Linux.intel.64.intelmpi.default/
ESMF_PNETCDF="standard"
ESMF_NETCDF_LIBPATH=/home/user/netcdf-intel/lib/
ESMF_NETCDF="split"
ESMF_PIO_LIBPATH=/home/user/app/ParallelIO/lib/
ESMF_PNETCDF_LIBS="-lpnetcdf"
ESMF_NETCDF_INCLUDE=/home/user/netcdf-intel/include/
ESMF_COMM=intelmpi
ESMF_PNETCDF_INCLUDE=/home/user/netcdf-intel/include/

 

[weixinyu]

Hi, I have solved this error, it's about my environment setting during ESMF installing. Now, I am going to share my environment setting under the newest ESMF version.

ESMF_DIR=/home/user/Downloads/esmf-8.6.0
ESMF_NETCDF_LIBS="-lnetcdf -lnetcdff"
ESMF_COMPILER=intel
ESMF_INSTALL_PREFIX=/home/user/app/esmf/
ESMF_PIO="internal"
ESMF_PIO_INCLUDE=/home/user/app/ParallelIO/include/
ESMF_PNETCDF_LIBPATH=/home/user/netcdf-intel/lib/
ESMFBIN_PATH=/home/user/app/esmf/bin/binO/Linux.intel.64.intelmpi.default/
ESMF_PNETCDF="standard"
ESMF_NETCDF_LIBPATH=/home/user/netcdf-intel/lib/
ESMF_NETCDF="split"
ESMF_PIO_LIBPATH=/home/user/app/ParallelIO/lib/
ESMF_PNETCDF_LIBS="-lpnetcdf"
ESMF_NETCDF_INCLUDE=/home/user/netcdf-intel/include/
ESMF_COMM=intelmpi
ESMF_PNETCDF_INCLUDE=/home/user/netcdf-intel/include/

Dear Fuhao
I encountered the same problem as you when making the last map data, but since my computer itself only has 64 RAM, the display of the last data was broken, I read something related on the internet that says parallel compilation can solve this problem, so I tried parallel compilation, but I don't understand how parallel compilation is supposed to work, so I just modified the input command with
mpirun -np 10 . /mkmapdata.sh -r $GRIDNAME -f $GRIDFILE -t regional
I also modified the mkmapdata.sh file to include interactive=“NO”, but it still fails, and the single-core that worked before now also fails, I don't know what's wrong, can you please help me out? I will attach my esmf environment, thank you very much!