lnd_averages and lnd_diagnostics post-processing on derecho

[renatob]

I am trying to run lnd_averages on derecho (/glade/u/home/renatob/leaf_spectra/BSSP585_control/postprocess/lnd_averages) using the npl conda environment but I get the following error:

_FillValue attribute must be set when variable is created (using fill_value keyword to createVariable)
Traceback (most recent call last):
  File "/opt/ncar/cesm_postprocessing/diagnostics/diagnostics/lnd/lnd_avg_generator.py", line 229, in callPyAverager
    PyAverager.run_pyAverager(pyAveSpecifier)
  File "/opt/ncar/conda/lib/python3.7/site-packages/pyaverager/PyAverager.py", line 29, in run_pyAverager
    return PyAverager(spec)
  File "/opt/ncar/conda/lib/python3.7/site-packages/pyaverager/PyAverager.py", line 41, in __init__
    self.compute_averages(spec)
  File "/opt/ncar/conda/lib/python3.7/site-packages/pyaverager/PyAverager.py", line 352, in compute_averages
    collapse_dim=l_collapse_dim,
  File "/opt/ncar/conda/lib/python3.7/site-packages/pyaverager/climFileIO.py", line 501, in define_ave_file
    temp[mv] = create_meta_var(my_file[first_fn], mv, new_file, collapse_dim)
  File "/opt/ncar/conda/lib/python3.7/site-packages/pyaverager/climFileIO.py", line 295, in create_meta_var
    temp.setncattr(attr, getattr(var_hndl, attr))
  File "src/netCDF4/_netCDF4.pyx", line 4135, in netCDF4._netCDF4.Variable.setncattr
AttributeError: _FillValue attribute must be set when variable is created (using fill_value keyword to createVariable)

I fixed the paths to the obs_data (/glade/campaign/cesm/community/lmwg/diag/lnd_diag_data) too. Does anyone know how to fix this? Thanks.

 

[slevis]

This may relate to the fact that the land diagnostic package has not been ported to derecho and to casper as stated here:

Land Model Diagnostics Package

The link for downloading `lnd_diag4.2` here is broken. Can you please share the link for downloading the current land model diagnostics package. Thanks, Eva Sinha.

bb.cgd.ucar.edu

@oleson pls correct me if I'm wrong.