Many thank. Below is my config log (exiting with 1) Gfortran somehow is not recognized? Typing gfortran in my command window works perfectly well and I receive the 'no input files' warning.
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by MCT configure 2.8, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ /disk02/usr/people/me/Model/CESM1.2.2/models/utils/mct/configure CC=gcc FC=gfortran MPICC=mpicc MPIFC=mpif90 FCFLAGS=-O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr CPPDEFS= -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC CFLAGS= -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr NETCDF_PATH=/usr/lib64 LDFLAGS= LIBS=-L/usr/lib64/ -lnetcdf -lnetcdff --srcdir /disk02/usr/people/me/Model/CESM1.2.2/models/utils/mct
## --------- ##
## Platform. ##
## --------- ##
hostname = xxx
uname -m = x86_64
uname -r = 2.6.32-504.16.2.el6.x86_64
uname -s = Linux
uname -v = #1 SMP Wed Apr 22 06:48:29 UTC 2015
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = x86_64
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /disk02/usr/people/me/bin
PATH: /usr/lib64/qt-3.3/bin
PATH: /disk02/usr/local/opengrads
PATH: /usr/local/tools
PATH: /usr/local/bin
PATH: /bin
PATH: /usr/bin
PATH: /disk02/usr/local/heg/bin
PATH: /disk02/usr/local/mrt/bin
PATH: /usr/lib64/
PATH: /usr/lib64/mpich
PATH: /usr/lib64/mpich/lib
PATH: /usr/lib64/mpich/bin
PATH: /usr/lib64/gfortan/modules
PATH: /disk02/usr/people/me/Model/CESM_run/exe/
## ----------- ##
## Core tests. ##
## ----------- ##
configure:2358: checking for C compiler version
configure:2367: gcc --version >&5
gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)
Copyright (C) 2010 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:2378: $? = 0
configure:2367: gcc -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC)
configure:2378: $? = 0
configure:2367: gcc -V >&5
gcc: '-V' option must have argument
configure:2378: $? = 1
configure:2367: gcc -qversion >&5
gcc: unrecognized option '-qversion'
gcc: no input files
configure:2378: $? = 1
configure:2398: checking whether the C compiler works
configure:2420: gcc -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c -L/usr/lib64/ -lnetcdf -lnetcdff >&5
configure:2424: $? = 0
configure:2472: result: yes
configure:2475: checking for C compiler default output file name
configure:2477: result: a.out
configure:2483: checking for suffix of executables
configure:2490: gcc -o conftest -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c -L/usr/lib64/ -lnetcdf -lnetcdff >&5
configure:2494: $? = 0
configure:2516: result:
configure:2538: checking whether we are cross compiling
configure:2546: gcc -o conftest -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c -L/usr/lib64/ -lnetcdf -lnetcdff >&5
configure:2550: $? = 0
configure:2557: ./conftest
configure:2561: $? = 0
configure:2576: result: no
configure:2581: checking for suffix of object files
configure:2603: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:2607: $? = 0
configure:2628: result: o
configure:2632: checking whether we are using the GNU C compiler
configure:2651: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:2651: $? = 0
configure:2660: result: yes
configure:2669: checking whether gcc accepts -g
configure:2689: gcc -c -g conftest.c >&5
configure:2689: $? = 0
configure:2730: result: yes
configure:2747: checking for gcc option to accept ISO C89
configure:2810: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:2810: $? = 0
configure:2823: result: none needed
configure:2851: checking how to run the C preprocessor
configure:2882: gcc -E conftest.c
configure:2882: $? = 0
configure:2896: gcc -E conftest.c
conftest.c:9:28: error: ac_nonexistent.h: No such file or directory
configure:2896: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "MCT"
| #define PACKAGE_TARNAME "mct"
| #define PACKAGE_VERSION "2.8"
| #define PACKAGE_STRING "MCT 2.8"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h. */
| #include
configure:2921: result: gcc -E
configure:2941: gcc -E conftest.c
configure:2941: $? = 0
configure:2955: gcc -E conftest.c
conftest.c:9:28: error: ac_nonexistent.h: No such file or directory
configure:2955: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "MCT"
| #define PACKAGE_TARNAME "mct"
| #define PACKAGE_VERSION "2.8"
| #define PACKAGE_STRING "MCT 2.8"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| /* end confdefs.h. */
| #include
configure:2984: checking for grep that handles long lines and -e
configure:3042: result: /bin/grep
configure:3047: checking for egrep
configure:3109: result: /bin/grep -E
configure:3114: checking for ANSI C header files
configure:3134: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3134: $? = 0
configure:3207: gcc -o conftest -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c -L/usr/lib64/ -lnetcdf -lnetcdff >&5
configure:3207: $? = 0
configure:3207: ./conftest
configure:3207: $? = 0
configure:3218: result: yes
configure:3231: checking for sys/types.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for sys/stat.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for stdlib.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for string.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for memory.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for strings.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for inttypes.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for stdint.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3231: checking for unistd.h
configure:3231: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3231: $? = 0
configure:3231: result: yes
configure:3243: checking whether byte ordering is bigendian
configure:3258: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
conftest.c:20: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'a'
configure:3258: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "MCT"
| #define PACKAGE_TARNAME "mct"
| #define PACKAGE_VERSION "2.8"
| #define PACKAGE_STRING "MCT 2.8"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #ifndef __APPLE_CC__
| not a universal capable compiler
| #endif
| typedef int dummy;
|
configure:3303: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
configure:3303: $? = 0
configure:3321: gcc -c -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.c >&5
conftest.c: In function 'main':
conftest.c:26: error: 'not' undeclared (first use in this function)
conftest.c:26: error: (Each undeclared identifier is reported only once
conftest.c:26: error: for each function it appears in.)
conftest.c:26: error: expected ';' before 'big'
configure:3321: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "MCT"
| #define PACKAGE_TARNAME "mct"
| #define PACKAGE_VERSION "2.8"
| #define PACKAGE_STRING "MCT 2.8"
| #define PACKAGE_BUGREPORT ""
| #define PACKAGE_URL ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include
| #include
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:3449: result: no
configure:3576: checking for Fortran compiler version
configure:3585: gfortran --version >&5
GNU Fortran (GCC) 4.4.7 20120313 (Red Hat 4.4.7-11)
Copyright (C) 2010 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:3596: $? = 0
configure:3585: gfortran -v >&5
Using built-in specs.
Target: x86_64-redhat-linux
Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux
Thread model: posix
gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC)
configure:3596: $? = 0
configure:3585: gfortran -V >&5
gfortran: '-V' option must have argument
configure:3596: $? = 1
configure:3585: gfortran -qversion >&5
gfortran: unrecognized option '-qversion'
gfortran: no input files
configure:3596: $? = 1
configure:3605: checking whether we are using the GNU Fortran compiler
configure:3618: gfortran -c -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.F >&5
gfortran: FFLAGS:=: No such file or directory
configure:3618: $? = 1
configure: failed program was:
| program main
| #ifndef __GNUC__
| choke me
| #endif
|
| end
configure:3627: result: no
configure:3633: checking whether gfortran accepts -g
configure:3644: gfortran -c -g conftest.f >&5
configure:3644: $? = 0
configure:3652: result: yes
configure:3694: checking for Fortran flag to compile .F90 files
configure:3714: gfortran -c -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr conftest.F90 >&5
gfortran: FFLAGS:=: No such file or directory
configure:3714: $? = 1
configure: failed program was:
| program main
|
| end
configure:3714: gfortran -c -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr -qsuffix=f=F90 conftest.F90 >&5
gfortran: FFLAGS:=: No such file or directory
gfortran: unrecognized option '-qsuffix=f=F90'
configure:3714: $? = 1
configure: failed program was:
| program main
|
| end
configure:3714: gfortran -c -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr -Tf conftest.F90 >&5
gfortran: FFLAGS:=: No such file or directory
configure:3714: $? = 1
configure: failed program was:
| program main
|
| end
configure:3714: gfortran -c -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr -x f95 conftest.F90 >&5
gfortran: FFLAGS:=: No such file or directory
configure:3714: $? = 1
configure: failed program was:
| program main
|
| end
configure:3723: result: unknown
configure:3726: error: Fortran could not compile .F90 files
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_env_AR_set=
ac_cv_env_AR_value=
ac_cv_env_BABELROOT_set=
ac_cv_env_BABELROOT_value=
ac_cv_env_BIT64_set=
ac_cv_env_BIT64_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value='gcc '
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value=' -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr'
ac_cv_env_COMPILER_ROOT_set=
ac_cv_env_COMPILER_ROOT_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_DEBUG_set=set
ac_cv_env_DEBUG_value=FALSE
ac_cv_env_ENDIAN_set=
ac_cv_env_ENDIAN_value=
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value='-O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr'
ac_cv_env_FC_set=set
ac_cv_env_FC_value='gfortran '
ac_cv_env_FORT_SIZE_set=
ac_cv_env_FORT_SIZE_value=
ac_cv_env_FPPFLAGS_set=
ac_cv_env_FPPFLAGS_value=
ac_cv_env_FPP_set=
ac_cv_env_FPP_value=
ac_cv_env_INCLUDEFLAG_set=
ac_cv_env_INCLUDEFLAG_value=
ac_cv_env_INCLUDEPATH_set=
ac_cv_env_INCLUDEPATH_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=set
ac_cv_env_LIBS_value='-L/usr/lib64/ -lnetcdf -lnetcdff'
ac_cv_env_MPIFC_set=set
ac_cv_env_MPIFC_value='mpif90 '
ac_cv_env_MPIHEADER_set=
ac_cv_env_MPIHEADER_value=
ac_cv_env_MPILIBS_set=set
ac_cv_env_MPILIBS_value=mpich
ac_cv_env_OPT_set=
ac_cv_env_OPT_value=
ac_cv_env_PROGFCFLAGS_set=
ac_cv_env_PROGFCFLAGS_value=
ac_cv_env_RANLIB_set=
ac_cv_env_RANLIB_value=
ac_cv_env_REAL8_set=
ac_cv_env_REAL8_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_fc_compiler_gnu=no
ac_cv_fc_srcext_F90=unknown
ac_cv_header_inttypes_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_unistd_h=yes
ac_cv_objext=o
ac_cv_path_EGREP='/bin/grep -E'
ac_cv_path_GREP=/bin/grep
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_fc_g=yes
## ----------------- ##
## Output variables. ##
## ----------------- ##
AR=''
BABELROOT=''
BIT64=''
CC='gcc '
CFLAGS=' -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC -I.. -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr'
COMPILER_ROOT=''
CPP='gcc -E'
CPPDEFS=' -DLINUX -DNDEBUG -DMCT_INTERFACE -DHAVE_MPI -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRGNU -DHAVE_SLASHPROC'
CPPFLAGS=''
CRULE=''
DEBUG='FALSE'
DEFS=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/bin/grep -E'
ENDIAN=''
EXEEXT=''
FC='gfortran '
FCFLAGS='-O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none FFLAGS:= -O -fconvert=big-endian -ffree-line-length-none -ffixed-line-length-none -fno-range-check -I/usr/include -I/usr/lib64/gfortran/modules -ffree-form -I. -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/MCT/noesmf/a1l1r1i1o1g1w1/csm_share -I/usr/include -I/disk02/usr/people/me/Model/CESM_run/exe/gnu/mpich/nodebug/nothreads/include -I/disk02/usr/people/me/Model/CESM1.2.2/models/csm_share/shr'
FCFLAGS_F90=''
FCFLAGS_F=''
FCLIBS=''
FC_DEFINE=''
FORT_SIZE=''
FPP=''
FPPFLAGS=''
GREP='/bin/grep'
INCLUDEFLAG=''
INCLUDEPATH=''
LDFLAGS=''
LIBOBJS=''
LIBS='-L/usr/lib64/ -lnetcdf -lnetcdff'
LTLIBOBJS=''
MPIFC='mpif90 '
MPIHEADER=''
MPILIBS='mpich'
MPISERPATH=''
OBJEXT='o'
OPT=''
PACKAGE_BUGREPORT=''
PACKAGE_NAME='MCT'
PACKAGE_STRING='MCT 2.8'
PACKAGE_TARNAME='mct'
PACKAGE_URL=''
PACKAGE_VERSION='2.8'
PATH_SEPARATOR=':'
PROGFCFLAGS=''
PYTHON=''
PYTHONOPTS=''
RANLIB=''
REAL8=''
SHELL='/bin/sh'
ac_ct_CC=''
ac_ct_FC=''
bindir='${exec_prefix}/bin'
build_alias=''
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host_alias=''
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='NONE'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "MCT"
#define PACKAGE_TARNAME "mct"
#define PACKAGE_VERSION "2.8"
#define PACKAGE_STRING "MCT 2.8"
#define PACKAGE_BUGREPORT ""
#define PACKAGE_URL ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
configure: exit 1
