Hi, I am currently trying to port CISM on a linux machine. I have adapted the config_machines.xml, config_compilers.xml files and config_batch.xml files. when I do the test './scripts_regression_tests.py J_TestCreateNewcase', it returns 3 failures. Any help with this would be much appreciated! The files and errors messages are attached. Thanks, Chris
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Porting failures
- Thread starter earmzh
- Start date
There is a build error here:
ERROR: /home/home01/earmzh/pkgs/my_cesm_sandbox/cime/src/build_scripts/buildlib.pio FAILED, cat /home/home01/earmzh/cases/scripts_regression_test.20210819_221806/TestCreateNewcase/testcreatenewcase/bld/pio.bldlog.210819-221810
ERROR: /home/home01/earmzh/pkgs/my_cesm_sandbox/cime/src/build_scripts/buildlib.pio FAILED, cat /home/home01/earmzh/cases/scripts_regression_test.20210819_221806/TestCreateNewcase/testcreatenewcase/bld/pio.bldlog.210819-221810
Hi Jim Edwards,
Thank you very much for this note!
I have checked files for the build error, the error messages are:
"failed rc=2 out=cat: Srcfiles: No such file or directory",
and "gmake: *** [/home/home01/earmzh/cases/scripts_regression_test.20210820_132931/TestCreateNewcase/testcreatenewcase/bld/cesm.exe] Error 1"
Attached are the files.
Do you have any suggestions to fix this?
Cheers,
Chris
Thank you very much for this note!
I have checked files for the build error, the error messages are:
"failed rc=2 out=cat: Srcfiles: No such file or directory",
and "gmake: *** [/home/home01/earmzh/cases/scripts_regression_test.20210820_132931/TestCreateNewcase/testcreatenewcase/bld/cesm.exe] Error 1"
Attached are the files.
Do you have any suggestions to fix this?
Cheers,
Chris
Attachments
These are different that the error you posted first. In the cesm.bldlog.210820-132934 you have an undefined external -
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_tostr@FABRIC_1.0'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_dupinfo@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_strerror@FABRIC_1.0'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_freeinfo@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_fabric@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_getinfo@FABRIC_1.1'
This is a system issue - contact your administrators.
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_tostr@FABRIC_1.0'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_dupinfo@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_strerror@FABRIC_1.0'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_freeinfo@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_fabric@FABRIC_1.1'
//apps/developers/libraries/intelmpi/2019.4.243/1/intel-19.0.4/intel64/lib/release/libmpi.so.12: undefined reference to `fi_getinfo@FABRIC_1.1'
This is a system issue - contact your administrators.