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Problem building a case with CLM5 on an intel machine

1

18789461762@163_com

New Member
Hi.I am new to CLM5.0.Recently, I am trying to port clm5.0 without CESM on a platform. Should I need to port CIME on the platform firstly?Could you give me some suggestions for the beginning?Now I am very confused about how to start.I want some suggestions for the step to port and run stand-alone CLM5.0.Thanks so much.
 
1

18789461762@163_com

New Member
Hi.I am new to CLM5.0.Recently, I am trying to port clm5.0 without CESM on a platform. Should I need to port CIME on the platform firstly?Could you give me some suggestions for the beginning?Now I am very confused about how to start.I want some suggestions for the step to port and run stand-alone CLM5.0.Thanks so much.
 
W

wanglh@mail_iap_ac_cn

New Member
hihave you met the error when you build the clm5:/public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90(4333): error #6780: A dummy argument with the INTENT(IN) attribute shall not be defined nor become undefined.   [QFLX_TRAN_VEG]       qflx_tran_veg(p) = soilflux-------^compilation aborted for /public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90 (code 1)gmake: *** [PhotosynthesisMod.o] Error 1
and I have modified  the row4158 where 'type(waterflux_type)   , intent(in)  :: waterflux_inst'  to 'type(waterflux_type)   , intent(inout)  :: waterflux_inst' but the build process is stuck in lnd. and the lnd.bldlog.180523-145327 is empty 
 
W

wanglh@mail_iap_ac_cn

New Member
hihave you met the error when you build the clm5:/public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90(4333): error #6780: A dummy argument with the INTENT(IN) attribute shall not be defined nor become undefined.   [QFLX_TRAN_VEG]       qflx_tran_veg(p) = soilflux-------^compilation aborted for /public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90 (code 1)gmake: *** [PhotosynthesisMod.o] Error 1
and I have modified  the row4158 where 'type(waterflux_type)   , intent(in)  :: waterflux_inst'  to 'type(waterflux_type)   , intent(inout)  :: waterflux_inst' but the build process is stuck in lnd. and the lnd.bldlog.180523-145327 is empty 
 
W

wanglh@mail_iap_ac_cn

New Member
hihave you met the error when you build the clm5:/public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90(4333): error #6780: A dummy argument with the INTENT(IN) attribute shall not be defined nor become undefined.   [QFLX_TRAN_VEG]       qflx_tran_veg(p) = soilflux-------^compilation aborted for /public/xzh/wanglh/clm5.0/cime/scripts/test4/SourceMods/src.clm/PhotosynthesisMod.F90 (code 1)gmake: *** [PhotosynthesisMod.o] Error 1
and I have modified  the row4158 where 'type(waterflux_type)   , intent(in)  :: waterflux_inst'  to 'type(waterflux_type)   , intent(inout)  :: waterflux_inst' but the build process is stuck in lnd. and the lnd.bldlog.180523-145327 is empty 
 
K

kamingfung@link_cuhk_edu_hk

New Member
It may be caused by an incompatible Fortran compiler, that couldn't recognize the syntax in that .F90 file.
You may need to configure your Macros.make to specify a newer compiler, like gfortran
 
K

kamingfung@link_cuhk_edu_hk

New Member
It may be caused by an incompatible Fortran compiler, that couldn't recognize the syntax in that .F90 file.
You may need to configure your Macros.make to specify a newer compiler, like gfortran
 
K

kamingfung@link_cuhk_edu_hk

New Member
It may be caused by an incompatible Fortran compiler, that couldn't recognize the syntax in that .F90 file.
You may need to configure your Macros.make to specify a newer compiler, like gfortran
 
W

wanglh@mail_iap_ac_cn

New Member
Thank you so much.I appended my Macros.make belowCPPDEFS = -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRINTEL
SLIBS+=# USERDEFINED $(shell $(NETCDF_PATH)/bin/nc-config --flibs)
CFLAGS:= -O3 -xHost -fp-model fast -std=c99
CONFIG_ARGS:=
CXX_LDFLAGS:= -cxxlib 
CXX_LINKER:=FORTRAN
ESMF_LIBDIR:=
FC_AUTO_R8:= -r8 
FFLAGS := -O3 -xHost -fp-model fast -mkl -no-prec-div -no-prec-sqrt -override-limits #FFLAGS := -O3 -fp-model source -convert big_endian -assume byterecl -ftz -traceback
FFLAGS_NOOPT:= -O0 
FIXEDFLAGS:= -fixed -132 
FREEFLAGS:= -free 
MPICC:= mpiicc  
MPICXX:= mpicxx 
MPIFC:= mpiifort 
MPI_LIB_NAME:=mpi
MPI_PATH:=/opt/intel/impi/5.1.1.109
NETCDF_PATH:=/opt/soft/netcdf/c_4.3.3.1_cxx_4.2.1_fortran_4.4.2/2
PNETCDF_PATH:=/public/xzh/soft/pnetcdf1.3.1
SCC:= icc 
SCXX:= icpc 
SFC:= ifort 
SUPPORTS_CXX:=TRUE
ifeq ($(DEBUG), TRUE)    FFLAGS += -g -CU -check pointers -fpe0 endif
ifeq ($(compile_threaded), true)    LDFLAGS += -openmp    CFLAGS += -openmp    FFLAGS += -openmp endif but I dont know how to set the FFLAGS properly
 
W

wanglh@mail_iap_ac_cn

New Member
Thank you so much.I appended my Macros.make belowCPPDEFS = -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRINTEL
SLIBS+=# USERDEFINED $(shell $(NETCDF_PATH)/bin/nc-config --flibs)
CFLAGS:= -O3 -xHost -fp-model fast -std=c99
CONFIG_ARGS:=
CXX_LDFLAGS:= -cxxlib 
CXX_LINKER:=FORTRAN
ESMF_LIBDIR:=
FC_AUTO_R8:= -r8 
FFLAGS := -O3 -xHost -fp-model fast -mkl -no-prec-div -no-prec-sqrt -override-limits #FFLAGS := -O3 -fp-model source -convert big_endian -assume byterecl -ftz -traceback
FFLAGS_NOOPT:= -O0 
FIXEDFLAGS:= -fixed -132 
FREEFLAGS:= -free 
MPICC:= mpiicc  
MPICXX:= mpicxx 
MPIFC:= mpiifort 
MPI_LIB_NAME:=mpi
MPI_PATH:=/opt/intel/impi/5.1.1.109
NETCDF_PATH:=/opt/soft/netcdf/c_4.3.3.1_cxx_4.2.1_fortran_4.4.2/2
PNETCDF_PATH:=/public/xzh/soft/pnetcdf1.3.1
SCC:= icc 
SCXX:= icpc 
SFC:= ifort 
SUPPORTS_CXX:=TRUE
ifeq ($(DEBUG), TRUE)    FFLAGS += -g -CU -check pointers -fpe0 endif
ifeq ($(compile_threaded), true)    LDFLAGS += -openmp    CFLAGS += -openmp    FFLAGS += -openmp endif but I dont know how to set the FFLAGS properly
 
W

wanglh@mail_iap_ac_cn

New Member
Thank you so much.I appended my Macros.make belowCPPDEFS = -DFORTRANUNDERSCORE -DNO_R16 -DLINUX -DCPRINTEL
SLIBS+=# USERDEFINED $(shell $(NETCDF_PATH)/bin/nc-config --flibs)
CFLAGS:= -O3 -xHost -fp-model fast -std=c99
CONFIG_ARGS:=
CXX_LDFLAGS:= -cxxlib 
CXX_LINKER:=FORTRAN
ESMF_LIBDIR:=
FC_AUTO_R8:= -r8 
FFLAGS := -O3 -xHost -fp-model fast -mkl -no-prec-div -no-prec-sqrt -override-limits #FFLAGS := -O3 -fp-model source -convert big_endian -assume byterecl -ftz -traceback
FFLAGS_NOOPT:= -O0 
FIXEDFLAGS:= -fixed -132 
FREEFLAGS:= -free 
MPICC:= mpiicc  
MPICXX:= mpicxx 
MPIFC:= mpiifort 
MPI_LIB_NAME:=mpi
MPI_PATH:=/opt/intel/impi/5.1.1.109
NETCDF_PATH:=/opt/soft/netcdf/c_4.3.3.1_cxx_4.2.1_fortran_4.4.2/2
PNETCDF_PATH:=/public/xzh/soft/pnetcdf1.3.1
SCC:= icc 
SCXX:= icpc 
SFC:= ifort 
SUPPORTS_CXX:=TRUE
ifeq ($(DEBUG), TRUE)    FFLAGS += -g -CU -check pointers -fpe0 endif
ifeq ($(compile_threaded), true)    LDFLAGS += -openmp    CFLAGS += -openmp    FFLAGS += -openmp endif but I dont know how to set the FFLAGS properly
 
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