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Hi all,
I'm trying to port CESM2.3.alpha17 to my HPC. When I run the ensemble test for F2000climo after installing the model:
:/$CESMROOT/tools/statistical_ensemble_test> python ensemble.py --case $CESMROOT/runs/F2000climo_CESM2.3.alpha17.uf.0000 --ect cam --uf --mach archer2 --compset...
Hello,
When I built the CESM1.2. model via the command "./*.build", an error like icc doesn't exist occured as follows:
" /iCESM1_2_0_1_geotrace_n02/models/utils/mct/configure: line 2347: icc: command not found
configure:2356: $? = 127"
But, actually icc exits on derecho...
Hi everyone,
I'm trying to port cesm to a new machine (linux server with no batch system). First, I installed the cesm2.1.5 following the steps described here (Downloading CESM2 (CESM2.1) — CESM CESM2.1 documentation), then created a ~/.cime/config_machines.xml specifically for this machine by...
Dear CESM community,
I am currently setting up CESM2.2.2 for a new machine (Imperial College HPC). The cluster uses pbs, but the job queue is not specified at submit time. Instead, the queue is chosen based on the job's requirements (and specific queue selection by users appears to be...
Dear All,
I am trying to port CESM2.1.3 to a HPC system.
After compiling and installing the required software libraries, I tried to run a test case with compset "B1850".
However, when executing case.build, an error related to 'UnicodeDecodeError' occurred.
The error occurs during the...
Dear CESM Community,
I am a complete newbie with CLM (though I have experience of other land surface models run on UNIX platforms). I have been trying to put together a first run of CLM, but I am completely stuck on the process of creating a CASE.
To cut a long story short, I am trying to do...
Dear all,
Recently I'm porting cesm2.1.3. I create a newcase to test the model. My compset is F2000climo. But the ocn component is stuck when I run this model.
You can see the cpl.log always keep the statue of "Initialize component ocn". I don't know why. Any idea?
The attachment is...
I have a problem in porting CESM2 in cluster server.
I downloaded the cesm2 code by git, and I modified the config_(machines, batch, compiler).xml files.
(I add part for my machine)
but when I test for create_test, I have a error like in image.
Is there any job should I do?
Hi all,
I'm porting CESM2.3.beta08 to the ARCHER2 HPC here in the UK. My colleagues have previously successfully ported CESM2.1.3 but we have a research need for more recent model features. We have a script to install the model and a module file to go with it (attached).
Following the usual...
To Whom this may concern,
I am posting this as potential help for people with similar issues. I have a solution for an error that randomly can happen with cesm2 configured with openmpi/3.1.1 on the niagara supercomputer. This may occur on other systems too.
Jobs will submit just fine, output...
Hello everyone, I'm attempting to run CESM1.2.2.1 on Derecho and have encountered build errors. Does anyone have suggestions or insights on resolving this issue? Thank you!
>> ./test.build:
CESM BUILDEXE SCRIPT STARTING
rm: No match.
COMPILER is intel
- Build Libraries: mct gptl pio...
Hello everyone!
I am running CLM5 for a single point in my computer and I have read the guide 1.6.3.5. Example: Creating a surface dataset for a single point. When compile the "gen_domain", I used the following command:
../../../configure --macros-format Makefile --mpilib mpi-serial --machine...
Hello
When I am porting CESM 2.2.0 to a ubuntu server, I met an error during the ./case.build as shown below.
My config_machines.xml and config _compilers.xml and bld.log are attached.
Thanks for any reply.
Hi all, I'm trying to install CESM2.1.4 on the DOE machine Perlmutter (CPU nodes). I've updated the config_machines.xml and config_batch.xml files. However, I'm unsure how to modify the config_compilers.xml to fit Perlmutter-cpu.
After using the revised config_machines.xml, config_batch.xml...
Hi all,
We've successfully ported CESM2.1.3 to an HPC. Alas, said HPC was recently taken offline for various 'upgrades', and CESM2.1.3 no longer runs properly. After an extended session of whack-a-mole with various error messages, I've come across one which has me stumped. A test case using the...
Hi,
I am testing CESM2.1.3 on my local Linux (Ubuntu). I have built the case successfully but there is an error (AttributeError: 'NoneType' object has no attribute 'getfile') when I run "./case.submit".
I did follow the suggestions by changing ftp://ftp.cgd.ucar.edu/cesm/inputdata to...
To Whom this may concern,
I am porting CESM2 to the Niagara supercomputer on SciNet. I have managed to complete builds and submit single jobs (successfully), but the resubmission tool is not working.
I receive a "Jobs can only be submitted from the login node" SBATCH error (using slurm...
To Whom this may concern,
I receive the following exit error (slurm batch) at about 2:02 minutes into a run:
When running an instance of the model CESM2 on niagara I run into the following error:
Traceback (most recent call last):
File "/var/spool/slurm/slurmd/job9684628/slurm_script", line...
Hi all,
We just ported CESM2.2.0 to our hpc system. I did a startup run with FHIST_BGC compset to test the model. The case was successfully compiled but failed with the following weird error in cesm log...
Hello everyone,
I am a research scholar and I have ported CESM 1.2.2 to a Linux server with 2 CPUs(or sockets) each having 12 cores, 2 threads per core i.e. 48 processes. I performed the ERS test on compset FAMIPC5 (TestStatus: PASS) and got a throughput of 0.29 myear/wday. I am still using...
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