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porting

  1. N

    CESM2 porting to Niagara on SciNet (Part of Digital Research Alliance of Canada), no internet on compute nodes

    To Whom this may concern, I receive the following exit error (slurm batch) at about 2:02 minutes into a run: When running an instance of the model CESM2 on niagara I run into the following error: Traceback (most recent call last): File "/var/spool/slurm/slurmd/job9684628/slurm_script", line...
  2. K

    initInterp set_mindist error in cesm2.2.0 FHIST_BGC

    Hi all, We just ported CESM2.2.0 to our hpc system. I did a startup run with FHIST_BGC compset to test the model. The case was successfully compiled but failed with the following weird error in cesm log...
  3. S

    Load balancing compset FAMIPC5

    Hello everyone, I am a research scholar and I have ported CESM 1.2.2 to a Linux server with 2 CPUs(or sockets) each having 12 cores, 2 threads per core i.e. 48 processes. I performed the ERS test on compset FAMIPC5 (TestStatus: PASS) and got a throughput of 0.29 myear/wday. I am still using...
  4. C

    ERRO: NO variable gird found in case when create a newcase

    Hi,all. When i try to create a new case, some issue occurred. Error: No variable grid found in case. I guess it related to the wrong match to machine name. I write my machine name is config_machine.xml as <NODENAME_REGEX>MY1A</NODENAMEREGEX>(MY1A is my machine name.), but it doesn't work. I...
  5. C

    Porting CESM2,ERROR:xml.etree.ElementTree.ParseError: unbound prefix

    I wanna to port the CESM2 to the machine. I revised the config_machine.xml,config_batch.xml and config_compilers.xml. When i try to create new case, Error was reported. Traceback (most recent call last): File "./create_newcase", line 243, in <module> _main_func(__doc__) File...
  6. 1

    Porting error, CESM2.1.3

    Dear all, I am trying to set up CESM2.1.3 on a new cluster. Because I kept seeing the "NetCDF was not complied by the same version ..." error, I re-installed the NetCDF-c and Netcdf-fortran using the intel compiler. However, I now see a new error that says...
  7. K

    Case.setup error when porting CESM2 to a new machine

    Hi @jedwards, I am porting cesm2_1_1 to our university machine. The job scheduler is slurm. We added the following block to the config_machine.xml: <machine MACH="pace-hive"> <DESC>Georgia Tech PACE cluster, Linux RHEL7</DESC> <NODENAME_REGEX>.*.pace.gatech.edu</NODENAME_REGEX>...
  8. J

    cesm2_3_beta08 Porting error

    Hello. I am trying to port cesm2_3_beta08 to implement CAM6-MOM6 coupled model. config_machines.xml, config_batch.xml, and config_compilers.xml that worked in CESM 2.2 version were used for porting cesm2_3_beta08, but the following error occurred during ./case.setup. Previous CESM 2.2 versions...
  9. J

    Machine not found when trying to set up cpnrc

    Hi, I'm trying to install CESM2.1.3 on the UK HPC ARCHER2. I have successfully run checkout_externals so should have the model working, but apparently I need to set up a programme called cpnrc. When I run the command ../configure --macros-format=Makefile --mpilib=mpi-serial I get the error...
  10. J

    Porting CESM, run error: forrtl: severe (174): SIGSEGV, segmentation fault occurred

    We have been trying to run the Community Earth System Model V2.2. (cesm2.2.0-0-g332937b) on the local HPC infrastructure. Unfortunately, we have been running into some issues and are now stuck. Given the nature of the error message which occurs during the run using slurm “forrtl: severe (174)...
  11. adrienD

    Regional grid run computing time issue

    Hello everyone, I recently had to reinstall CTSM on a new version of the supercomputer I use (Levante from DKRZ). I took the opportunity to reinstall a more up-to-date version of CTSM (from dev023 to dev086). So far, with your help, I have managed to build and run a default global grid with a...
  12. adrienD

    clm50_params.c211112.nc missing on UCAR server

    Hi, I am trying to use the compset I2000Clm50Sp on the new levante server from DKRZ. I have managed to build the model but I am missing a file. I believe that the parameter file clm50_params.c211112.nc needed for this compset is not available on the UCAR server. I can download all the other...
  13. S

    Porting CESM2 to a machine with Slurm but no module manager

    Hello, I am currently attempting to port CESM (v2.1.1) to a new machine which uses Slurm for queue management, but which does not use a module system. As such, I am struggling to understand how I can supply information about my environment to CESM when running a case. I am able to set up a...
  14. C

    POP-ECT Failure with CESM2.1.3

    Hi all I am double checking a port of CESM 2.1.3 on Archer2 and the POP-ECT test is failing, even though the UF-ECT succeeds with no issue. The output on the verification website is I am running with the following modules loaded, and the architecture is AMD EPYC (mentioned because a thread...
  15. M

    POP-ECT Failure

    Hello, I am using CESM 2.1.3 and it can run normally without any error. My machine have passed the CESM UF-ECT successfully before, so I think my porting is OK. For the sake of scientific rigor, I decide to run the POP-ECT before officially running my experiment, i.e., cmip6 piControl and...
  16. N

    Failed to convert GOTPCREL relocation: building cesm1_2 on NERSC Cori

    After the recently system update on Cori, I can’t build the CESM1.2 on NERSC Cori any more. It gives the error message below: Load a valid targeting module or set CRAY_CPU_TARGET ccsm_comp_mod.o: in function `ccsm_comp_mod_mp_ccsm_run_': ccsm_comp_mod.F90:(.text+0x28): relocation truncated to...
  17. T

    Issue with setting up CESM on new system

    Dear CESM community, We have been trying to set up CESM v2.1.3 on the new system at our institute but we're facing a lot of problems. As it stands now, we are able to create a case and build it successfully. When we submit the job, an error shows up (segmentation fault) in the log files...
  18. P

    Porting issues with CESM2.2, multiple errors in scripts_regression_tests.py

    Hello, (I tried to post this before, but I think it was rejected, probably because I attached the files wrongly. If that is not the case, and this is a duplicate, please let me know and delete this. Thank you!) I am attempting to port CESM2.2 to a local linux machine with intel and gnu...
  19. C

    SIGFPE errors in prealpha tests for CESM 2.1.3

    I am trying to verify a port on the Archer2 computer in Edinburgh and am running the pre-alpha tests. After much trial and error I have got the number of failed tests down to "only" 29 out of 70 tests. A full 19 of those remaining 29 are floating point errors in one of three files...
  20. X

    Error in porting CESM1.2

    Hi! I ported the iCESM1.2, after i set the variables in env_build.xml, env_mach_pes.xml and env_run.xml, and called the cesm_setup again,there was the error: Running preview_namelist script Illegal variable name. ERROR: /home/user/iCESM1.2/scripts/test1/preview_namelists failed: 65280...
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