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ERROR:output data is abnormal

MabelSue

MabelSue
New Member
Dear Keith and all,

I encounter new issues.The model can be finished but some output figures are abnormal,TG e.g.

I've got inputdata with 'wget' again and everything seems OK.

I don't know what happened.

Thank you!!
_____________________________________________________________________________________

Here are issues:

./case.submit
-------------------------------------------
Archiving restarts for date date(2010, 6, 11, 0, 0, 0)
-------------------------------------------
Archiving restarts for datm (atm)
Archiving restarts for clm (lnd)
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.clm2.r.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.clm2.r.2010-06-11-00000.nc
WARNING: ncdump -v locfnh /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.clm2.rh0.2010-06-11-00000.nc failed rc=1
out=
err=ncdump: locfnh: No such variable
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.clm2.rh0.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.clm2.rh0.2010-06-11-00000.nc
Archiving restarts for mosart (rof)
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.mosart.r.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.mosart.r.2010-06-11-00000.nc
WARNING: ncdump -v locfnh /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.mosart.rh0.2010-06-11-00000.nc failed rc=1
out=
err=ncdump: locfnh: No such variable
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.mosart.rh0.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.mosart.rh0.2010-06-11-00000.nc
Archiving restarts for cism (glc)
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.cism.r.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.cism.r.2010-06-11-00000.nc
Archiving restarts for drv (cpl)
copying file /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.cpl.r.2010-06-11-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/rest/2010-06-11-00000/I2000Clm50Sp002.cpl.r.2010-06-11-00000.nc
Archiving restarts for dart (esp)
Archiving history files for datm (atm)
Archiving history files for clm (lnd)
Archiving history files for mosart (rof)
Archiving history files for cism (glc)
moving /mnt/bbj/cesm2/scratch/I2000Clm50Sp002/run/I2000Clm50Sp002.cism.initial_hist.2010-06-06-00000.nc to /mnt/bbj/cesm2/archive/I2000Clm50Sp002/glc/hist/I2000Clm50Sp002.cism.initial_hist.2010-06-06-00000.nc
Archiving history files for drv (cpl)
Archiving history files for dart (esp)
st_archive completed
ERROR: No result from jobs [('case.run', None), ('case.st_archive', 'case.run or case.test')]

_____________________________________________________________________________________

TG:
..67460.7643302501, 66863.8686734612, 66854.8945584697, 66951.3042668415,
67216.8082894273, 67718.4485279909, 67433.3443004442, 67162.30146439,
67263.6492073589, 67088.3890001196, 67125.6906699732, 67277.3430168901,
66946.4778024522, 66706.0350213624, 66169.0678132023, 65830.5649152346,
66266.0437671996, 66220.7189536703, 66468.4559517835, 65940.0534968486,
65852.9435425841, 65993.9577235175, 66688.4847211041, 66943.3238929987,
66518.1902314293, 66500.8193406379, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36,
1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36,
1e+36, 1e+36, 69222.4254614732, 68043.3680987624, 68994.0252800245,
68497.2312073751,
1e+36, 1e+36, 1e+36, 69338.0046259812, 68302.7143209457, 67859.7877419243,
67821.800911742, 68765.1225242519, 68890.5069922636, 68057.7600798878,
68205.3192550278, 67622.7589388656, 67083.638542303, 66630.7046906478,
66915.6082172554, 66940.4472273515, 66833.7616503754, 66931.1910175191,
67621.1180603179, 67820.866845324, 67836.0675006643, 67684.7144491545,
67837.8721175619, 67114.3040935185, 66999.2492282494, 68813.0797127415,
68898.0481150579, 69462.2489971984, 69917.0418316429, 69232.5078077096,
69031.6605359367, 68741.317745259, 68326.565759718, 67899.2768991071,
68331.6459748777, 67555.0893263128, 68335.7993054629, 67468.2047442202,
67902.0327302241, 66806.9620597991, 66836.4678367758, 66559.8397972377,
66500.5934093768, 66993.4894646184, 66547.9749534784, 67056.9383080909,
66518.8417803472, 66730.5005213575, 66724.6668742843, 66594.0358707217,
66935.6299634702, 66903.9526101298, 66527.2153243344, 66398.5084558032,
66449.6211702006, 67044.6836144111, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36,
1e+36, 65844.1032720712, 66766.1733651087, 66750.9930947799,
66298.7287419178, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36,
1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 66946.9985472181, 67122.8189679275,
66893.115486445, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36, 1e+36,
1e+36, 67218.9175809746, 66538.2683340774, 67130.1646964273,
67211.8812441393, 67293.9955018146, 67167.7084493995, 67283.0986066155,
67772.2445852858, 68124.5819789589, 67858.8182919847, 67657.5380133595,
67522.8300808562, 67418.4321396205, 67204.2467786316, 66832.6158192082,
66928.3520614832, 66542.3239001454, 66107.0860805562, 65790.3034470798,
65706.0852781969, 65670.2641993607, 1e+36, 65839.1116351818,
65974.4763553005, 66133.8548603693, 66290.9830867193, 66412.5323367463,
..
 

oleson

Keith Oleson
CSEG and Liaisons
Staff member
We're going to need more information to help with this:

 

MabelSue

MabelSue
New Member
We're going to need more information to help with this:

Oh Keith , thank you for your kind reply.

This problem had trapped me for days till you showed up.

I asked a supercomputer worker, neither she nor I could answer.
 

Attachments

  • MabelSueERRORS.zip
    209.4 KB · Views: 1

oleson

Keith Oleson
CSEG and Liaisons
Staff member
I see build logs in your attachment but can you attach the run logs from your case (lnd.log...., atm.log...., etc.)
Also, can you attach your lnd_in, datm_in, and datm.streams. files?
What version of CLM/CESM are you using (i.e., the output of git describe).
Has the model been successfully ported to your machine? Have you run any cases at all successfully?

Offhand, with ground temperatures that high, I would suspect something wrong with the atmospheric forcing perhaps.
 

MabelSue

MabelSue
New Member
I see build logs in your attachment but can you attach the run logs from your case (lnd.log...., atm.log...., etc.)
Also, can you attach your lnd_in, datm_in, and datm.streams. files?
What version of CLM/CESM are you using (i.e., the output of git describe).
Has the model been successfully ported to your machine? Have you run any cases at all successfully?

Offhand, with ground temperatures that high, I would suspect something wrong with the atmospheric forcing perhaps.
The version is 2.1.13.

The run logs seemed disappear after running.

Cases had finished but I didn't know whether success or not.

This is the first time I port CESM 2.1.13 to my machine.

I didn't change any atm forcing configuration.
 

Attachments

  • MabelSueERRORS2.zip
    6.3 KB · Views: 0

MabelSue

MabelSue
New Member
I see build logs in your attachment but can you attach the run logs from your case (lnd.log...., atm.log...., etc.)
Also, can you attach your lnd_in, datm_in, and datm.streams. files?
What version of CLM/CESM are you using (i.e., the output of git describe).
Has the model been successfully ported to your machine? Have you run any cases at all successfully?

Offhand, with ground temperatures that high, I would suspect something wrong with the atmospheric forcing perhaps.
I found run logs in archive directory.
 

Attachments

  • MabelSueERRORS3.zip
    44.5 KB · Views: 2

oleson

Keith Oleson
CSEG and Liaisons
Staff member
I assume you mean cesm2.1.3, not cesm2.1.13.
If the model finished successfully and the archiving script worked, then the log files would be in your archive directory for that case, which seems to be:
/mnt/bbj/cesm2/archive/I2000Clm50Sp002/logs according to your previous post.
But, if this is the first attempt at porting to your machine, have you followed these steps, in particular, run the tests that are suggested to test and validate the port?

 

MabelSue

MabelSue
New Member
I assume you mean cesm2.1.3, not cesm2.1.13.
If the model finished successfully and the archiving script worked, then the log files would be in your archive directory for that case, which seems to be:
/mnt/bbj/cesm2/archive/I2000Clm50Sp002/logs according to your previous post.
But, if this is the first attempt at porting to your machine, have you followed these steps, in particular, run the tests that are suggested to test and validate the port?

Thank you very much!

I'll try to test. I forgot it.
 
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