Thank you! this problem have been solved like you said that the problem is the ESMF. But I have also another problem: [guser002@login mkmapdata]$ export GRIDNAME=1x1_boulderCO
[guser002@login mkmapdata]$ export CDATE='date +150108'
[guser002@login mkmapdata]$ ./mknoocnmap.pl -p 40,255 -n $GRIDNAME
Create SCRIP grid and mapping files for a single-point
Create land SCRIP gridfile
Execute: env S_LAT=39.95 W_LON=254.95 N_LAT=40.05 E_LON=255.05 NX=1 NY=1 PTNAME=1x1_boulderCO GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc ncl mkscripgrid.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See
http://www.ncl.ucar.edu/ for more details.
Create ocean SCRIP gridfile
Execute: env S_LAT=39.95 W_LON=254.95 N_LAT=40.05 E_LON=255.05 NX=1 NY=1 PTNAME=1x1_boulderCO GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc IMASK=0 ncl mkscripgrid.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See
http://www.ncl.ucar.edu/ for more details.
Create unity mapping file between the two gridfile
Execute: env GRIDFILE1=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc GRIDFILE2=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc MAPFILE=map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.nc ncl /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapdata/mkunitymap.ncl
Copyright (C) 1995-2014 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.2.0
The use of this software is governed by a License Agreement.
See
http://www.ncl.ucar.edu/ for more details.
Successfully created grid/mapping files for single-point
[guser002@login mkmapdata]$ ls
createXMLEntries.pl mkunitymap.ncl regridbatch.sh
map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.nc mvNimport.sh rmdups.ncl
mkmapdata.sh PET0.RegridWeightGen.Log
mknoocnmap.pl README
[guser002@login mkmapdata]$ export CSMDATA=/public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata
[guser002@login mkmapdata]$ export ESMFBIN_PATH=/public3/home/external/gansu/guser002/software/esmf-6.3.0/bin/binO/Linux.intel.64.mpiuni.default
[guser002@login mkmapdata]$ export MY_ESMF_REGRID=/public3/home/external/gansu/guser002/software/esmf-6.3.0/bin/binO/Linux.intel.64.mpiuni.default/ESMF_RegridWeightGen
[guser002@login mkmapdata]$ export GRIDFILE=/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
[guser002@login mkmapdata]$ ./mkmapdata.sh -r $GRIDNAME -f $GRIDFILE -t regional
./mkmapdata.sh
Script to create mapping files required by mksurfdata_map
query command is ./../../../bld/queryDefaultNamelist.pl -silent -namelist clmexp -phys clm4_5 -justvalue -options sim_year=2000 -csmdata /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata
Using user specified scrip grid file: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Output grid resolution is 1x1_boulderCO
Machine login NOT recognized
Creating mapping file: map_0.5x0.5_AVHRR_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_0.5x0.5_AVHRR_c110228.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Skipping creation of map_0.5x0.5_AVHRR_to_1x1_boulderCO_nomask_aave_da_c150108.nc as already exists
Creating mapping file: map_0.5x0.5_MODIS_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_0.5x0.5_MODIS_c110228.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Skipping creation of map_0.5x0.5_MODIS_to_1x1_boulderCO_nomask_aave_da_c150108.nc as already exists
Creating mapping file: map_3x3min_LandScan2004_to_1x1_boulderCO_nomask_aave_da_c150108.nc
From input grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappingdata/grids/SCRIPgrid_3minx3min_LandScan2004_c120517.nc
For output grid: /public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shared/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Starting weight generation with these inputs:
Source File:
/public3/home/external/gansu/guser002/model/cesm1_2_1/inputdata/lnd/clm2/mappin
gdata/grids/SCRIPgrid_3minx3min_LandScan2004_c120517.nc
Destination File:
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
Weight File:
map_3x3min_LandScan2004_to_1x1_boulderCO_nomask_aave_da_c150108.nc
Source File is in SCRIP format
Source Grid is a global grid
Source Grid is a logically rectangular grid
Destination File is in SCRIP format
Destination Grid is a regional grid
Destination Grid is a logically rectangular grid
Regrid Method: conserve
Pole option: NONE
Ignore unmapped destination points
Output weight file in 64bit offset NetCDF file format
Norm Type: dstarea
./mkmapdata.sh: line 106: 13372 Segmentation fault (core dumped) ${cmd}
Error status returned from mkmapdata script
[guser002@login gen_domain_files]$ export OCNDOM=domain.ocn_noocean.nc
[guser002@login gen_domain_files]$ export ATMDOM domain.lnd.1x1_boulderCO_noocean.nc
[guser002@login gen_domain_files]$ export ATMDOM=domain.lnd.1x1_boulderCO_noocean.nc
[guser002@login gen_domain_files]$ ./gen_domain -m $MAPFILE -o $OCNDOM -l $ATMDOM
fmap =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
fn1_out_ocn= domain.ocn.domain.ocn_noocean.nc.150108.nc
fn2_out_lnd=
domain.lnd.domain.lnd.1x1_boulderCO_noocean.nc_domain.ocn_noocean.nc.150108.nc
fn2_out_ocn=
domain.ocn.domain.lnd.1x1_boulderCO_noocean.nc_domain.ocn_noocean.nc.150108.nc
usercomment= null
eps = 9.999999960041972E-013
fminval= 1.000000047497451E-003
fmaxval= 1.00000000000000
set_fv_pole_yc = 0
input SCRIP data...
pole_fix = F
input file =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
open
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapdata/map_1x1_boulderCO_noocean_to_1x1_boulderCO_nomask_aave_da_150108.n
c
domain_a =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc
domain_b =
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
grid_file_ocn=
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_noocean_c150108.nc
grid_file_atm=
/public3/home/external/gansu/guser002/model/cesm1_2_1/models/lnd/clm/tools/shar
ed/mkmapgrids/SCRIPgrid_1x1_boulderCO_nomask_c150108.nc
n,nv,ni,nj,na,ns= 1 4 1 1 1
1
output domain data...
nf = 1
create domain.ocn.domain.ocn_noocean.nc.150108.nc
write domain.ocn.domain.ocn_noocean.nc.150108.nc
(shr_sys_getenv) ERROR: no implementation of getenv for this architecture
(shr_sys_getenv) no implementation of getenv for this machine